Spongiibacter sp. IMCC21906: IMCC21906_01995
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Entry
IMCC21906_01995 CDS
T03945
Name
(GenBank) pseudouridine synthase family protein
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
spoi
Spongiibacter sp. IMCC21906
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spoi03009
]
IMCC21906_01995
Enzymes [BR:
spoi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
IMCC21906_01995
Ribosome biogenesis [BR:
spoi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IMCC21906_01995
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
DUF6691
Motif
Other DBs
NCBI-ProteinID:
AKH69667
UniProt:
A0A0F7M631
LinkDB
All DBs
Position
complement(2143597..2144205)
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AA seq
202 aa
AA seq
DB search
MCQFSEADGRLTLADYIKIPKIYPAGRLDFDSEGLLLLTADGRLQQHISDPRFKLPKTYW
VQVEGEITDAALIALQNGVTLKDGLTKPAKAEKILEPAGLWQRHPSVRYRAAIPTSWLSL
TITEGRNRQVRRMTAAVGFPTLRLIRAKIGDWDLTDLSPGEHCRAPVPPALIASSATRTA
VKKPKRLGSRTRLPHRNRRSRP
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtgccaattcagcgaagctgatggccgtttgactctggccgattacatcaagatccct
aagatttatccagccggtaggctagattttgactcagaaggcttgcttctgctgaccgct
gatggccgacttcagcagcatataagtgacccgcgctttaaactacccaaaacctattgg
gtacaggtagagggtgaaataactgatgctgccttaattgcgttacaaaatggcgtcacg
ctaaaagacggtcttaccaagcccgcaaaagccgaaaaaatactcgagcccgctgggctt
tggcagcggcatccgtcagtacgctatcgcgccgcaatccccacatcttggctatcatta
accattactgagggccgaaatcgtcaggtgcgacgcatgaccgcagcagttggctttcct
accctgcgcttaatccgcgcaaaaattggcgactgggatttaacagacttgtcgccgggt
gagcactgccgggcaccggtgccaccagcactgatcgcgtcgtcggcgacgagaacagca
gtaaaaaagccgaaacgacttggttcgcgtactcgtctcccccaccgaaatcgtcgcagt
aggccataa
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integrated database retrieval system
