Spongiibacter sp. IMCC21906: IMCC21906_02106
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Entry
IMCC21906_02106 CDS
T03945
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spoi
Spongiibacter sp. IMCC21906
Pathway
spoi03030
DNA replication
spoi03430
Mismatch repair
spoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMCC21906_02106
03430 Mismatch repair
IMCC21906_02106
03440 Homologous recombination
IMCC21906_02106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spoi03032
]
IMCC21906_02106
03400 DNA repair and recombination proteins [BR:
spoi03400
]
IMCC21906_02106
Enzymes [BR:
spoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMCC21906_02106
DNA replication proteins [BR:
spoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMCC21906_02106
DNA repair and recombination proteins [BR:
spoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMCC21906_02106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AKH69774
LinkDB
All DBs
Position
complement(2259355..2260074)
Genome browser
AA seq
239 aa
AA seq
DB search
MRQIVLDTETTGLDPSQGHRIIEIGCVELIGRRLTGRHYHQYINPGREVEAGAIEVHGIT
NEMLADKPVFSAIVDEFLDFIRGAELVIHNAPFDVGFIDAELKHIQRPESVTGLCSVVDT
LVMARQKHPGQRNSLDALCKRYMVDNSQRDLHGALLDSEILADVYLAMTGGQTKLALSAE
ESEEGSNEKSDGIRRLETNRPLLKVVRASATEMAEHEKLLETVDKASGGNCLWRGETRS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaaattgtcctggacactgaaaccacaggcctcgatccctctcagggacatcga
attatcgagataggttgtgtggagctgattgggcgacggctcaccggccgtcattatcat
caatatattaatcctggccgagaggtcgaagcgggcgcgattgaagttcacggcattacc
aatgagatgttggcagataagccggttttttctgccattgttgacgagtttttagatttt
atccgcggcgctgagctggttattcataatgcgccctttgacgttggctttatcgacgca
gagcttaaacatatacagcggccagaaagcgtcaccgggctttgctcagtggttgatacc
ttggttatggcccggcaaaaacatcccggtcaacgcaatagcctggatgcgctctgcaag
cgctatatggtggacaattcccagcgtgatcttcacggtgctttgcttgactcggaaatt
ttagctgacgtttacctcgcaatgactggggggcaaaccaagttggcactctcagcagag
gagtcggaagagggcagtaatgagaaaagtgatggcattcgtcgtttagagacaaatcga
ccgcttttaaaagtggttcgggccagcgcaacggaaatggccgagcatgaaaagttgctg
gaaacggtggataaagccagtggtggcaactgtctttggcgaggtgaaacacgctcataa
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