Spongiibacter sp. IMCC21906: IMCC21906_02288
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Entry
IMCC21906_02288 CDS
T03945
Name
(GenBank) transcriptional regulator, TetR family
KO
K18301
TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
Organism
spoi
Spongiibacter sp. IMCC21906
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spoi03000
]
IMCC21906_02288
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
spoi01504
]
IMCC21906_02288
Transcription factors [BR:
spoi03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
IMCC21906_02288
Antimicrobial resistance genes [BR:
spoi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
IMCC21906_02288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
HTH_Tnp_1_2
LacI
CNP_C_terminal
TetR_C_6
HTH_7
ORC_WH_C
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AKH69948
UniProt:
A0A0F7M6T8
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All DBs
Position
2435777..2436406
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AA seq
209 aa
AA seq
DB search
MTIQEDPSKSKKGRSKSEEKRFQIMAAASELFLEQGYENCSMEAIAKLAGVSKQTLYSHF
GGKEQLFSDAVEATCQQYRIWDNLDASANCYDYLEAFCISFAELLVSREALGVMRVCAAE
GGRSDVAELFWQAGPVKMRAKLKEFLSEQQRQGQLHFADVDTAASQLIAMLHGQTHTRLL
LGLDSSYDPKQLSRYAISCAQLFYKAHQD
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
gtgaccattcaagaagaccccagcaaaagcaaaaaaggtcgcagtaaaagcgaagaaaag
cgctttcaaattatggctgctgcatctgagctttttttagaacaaggctatgaaaactgc
agtatggaagcgattgccaaactggccggggtgtccaagcaaacgctttacagccacttt
ggcggcaaagagcagctgtttagtgacgctgtagaggcgacctgtcaacaataccgaatt
tgggataacttagacgccagcgcgaactgctacgactacctggaagcattttgcattagc
tttgccgaattactggtcagccgcgaggcgctgggggtgatgcgggtgtgcgccgccgaa
ggcggacgctctgacgtggctgagttattttggcaggccgggccagtcaaaatgcgggca
aagctcaaagagtttcttagcgagcaacaacggcaaggccaacttcactttgccgatgtg
gatactgcggcttcgcagcttattgccatgcttcacggccagacccatacccgtctgcta
ctggggctagatagcagctatgaccccaagcagctaagccgttacgccatttcttgcgcg
caactattttataaggcacatcaagattga
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