Spongiibacter sp. IMCC21906: IMCC21906_02402
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Entry
IMCC21906_02402 CDS
T03945
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
spoi
Spongiibacter sp. IMCC21906
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spoi03032
]
IMCC21906_02402
03400 DNA repair and recombination proteins [BR:
spoi03400
]
IMCC21906_02402
Enzymes [BR:
spoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IMCC21906_02402
DNA replication proteins [BR:
spoi03032
]
Prokaryotic type
DNA Topoisomerases
IMCC21906_02402
DNA repair and recombination proteins [BR:
spoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IMCC21906_02402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AKH70058
UniProt:
A0A0F7M758
LinkDB
All DBs
Position
complement(2556906..2559575)
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AA seq
889 aa
AA seq
DB search
MADIAKEILPVNIEDELKQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELNNDWN
KGYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDNAAAM
RYTEIRMQKLSHELLADLEKETVDWVPNYDGTEQIPAVLPTKVPNLLINGSSGIAVGMAT
NIPPHNLTEVVSACLAVLDNPDITIEELMEHVPGPDFPTAAIINGRAGIIEAYKTGRGRI
YVRARAEVITNEKTNKDTIIVTELPYQVNKARLIEKIAELVKEKKIEGISELRDESDKDG
LRVVVEMKRGESGEVVLNNLYAQTQLQNVFGINIVALVDNQPRILNLKELLEYFVRHRRE
VVTRRTVFLLRKARERGHVLEGLAVAISNIDEVITTIKASATTQEARENLLSRPWELGDV
SAMLERAGADACRPDDLEDHLGVRDGKYHLSAAQVQAILELRLQKLTGLEHEKLLEEYKV
KLDEITEYMNILGDHHALLAVIRGELEQVVADFGDERRTEIVASQLDLTHEDLIPEEERV
VTISHNGYAKSQPLDSYQAQRRGGMGKSATSVKEEDFVEHLLVANTHDTILCFSNIGKVY
WLKVYQIPVAGRNSRGRPMVNLLPLDESERITSILPVREYTEGYFIFMATEQGTVKKTPL
EAFSRRRSVGLRALELDEGDVLIGTAITNGDDDVVLLSSAGKAARFHEGDVRAMGRTARG
VRGIRMDEEQCVIAMIIPAEGGRVLTVSENGYGKRTPVEEFPCKGRGNRGVIAMTMSERN
GDLVGAVQVFEGDDLMLISDQGTLVRTRTDEVSQLGRNTQGVRVIRLREDEHLVGVQRVA
EADIDAELEEAELGAEAVNDGAATDDAAIPKQTPDVGPDDAPSDDPSES
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggctgacatagctaaagaaattcttcctgtaaatatcgaggacgagctaaagcagtcc
taccttgactacgcaatgagcgttatcgtcggccgggcactccccgatgtccgggacggc
ctcaagccagttcaccgtcgggtgttgttcgccatgagcgaactcaacaacgactggaat
aaaggctacaagaaatctgcccgggtggttggggatgtcatcggtaaataccatccccac
ggtgactcggcggtttacgacaccatcgttcgaatggcgcagccgttttcgctgcgttac
atgctggtggatggccaaggtaactttggttccatcgacggtgataacgcggcagcgatg
cgttacaccgaaattcgcatgcagaagctctcccatgagctgctggcggatttagaaaaa
gaaaccgtggattgggtgccgaactacgatggcacggaacagattccggcggtgttgccg
actaaggttcctaacctgctgattaatggctcgtcgggtattgcggtgggcatggcgacc
aatattccgccccataatctcaccgaagtggtgagtgcttgtttggcggtgttggataat
cccgatatcacgattgaagaattgatggagcatgtgccgggacccgattttcccactgca
gctatcatcaatggtcgcgcgggtattatcgaggcgtataaaacgggtcgaggtcgcatt
tatgtgcgtgctcgggctgaggtcattacaaatgagaagaccaacaaagacaccattatc
gtcaccgagttgccgtatcaggtaaacaaggctcgcttgattgaaaaaattgccgagctg
gtgaaagagaaaaaaatagaaggcatttctgagctccgggacgagtccgataaagacggt
ctgagggtggttgtggaaatgaaacggggcgagagtggcgaagtggtgttgaataacctc
tacgcccaaacccagctgcaaaacgtctttggcatcaatattgttgccttggtagataat
cagccgcgtattctcaatttaaaagagctgctggaatactttgtccgccatcgtcgtgaa
gtggttactcgccgcaccgtgttcttgctgcgtaaagctcgggaacgggggcatgtgttg
gaaggtttggcggtcgcgatctcgaacattgacgaagtcattaccacgattaaagcctct
gccaccacccaggaagcgcgcgaaaatttgttaagccgcccttgggaattgggtgatgtc
agcgcgatgttggagcgggcgggcgccgatgcctgtcgcccggatgatctcgaagatcac
cttggcgtgcgggatggcaaataccatctttccgctgcgcaagtgcaggcaattttagaa
ttgcgtctgcaaaagctaaccgggcttgagcatgaaaaactgcttgaagaatacaaggta
aagcttgatgaaataacagaatatatgaatattctgggtgatcatcacgcactgttggcg
gtgattcgcggcgaacttgagcaagtggtggccgactttggcgatgagcgtcgtaccgaa
attgtcgcctcgcaactggatttaacccacgaagacttgatccctgaagaagagcgggtg
gtgaccatttctcacaatggctacgccaagtctcagccgttagatagttatcaagctcag
cgtcgtggtggcatgggtaaatcggcaacctcggtaaaagaagaggactttgttgagcat
ctgttggtggccaatacccacgatactattttgtgtttcagcaatatcggtaaagtgtac
tggctgaaggtgtatcagattccagtggcgggccgtaactctcgtggtcgtccaatggtg
aacttgctgccactggatgagagcgagcgtattacctcgatcttacccgtgcgggaatac
accgaaggctacttcatctttatggccaccgaacaaggcacggtgaaaaagacgccactg
gaggcgttctctcgtcgccgaagtgttggtttgcgggcgctggagttggatgaaggtgat
gttttgattggcaccgcgatcactaacggtgatgacgacgtggtgctattgagcagtgcc
ggtaaagcagctcgattccacgaaggtgatgtgcgggcaatgggccgtactgcccgcggt
gtacgcggtattcgcatggatgaagagcagtgtgttatcgccatgattattccggccgag
ggtggccgggtgctgactgtatctgaaaacggttacggaaaacggactcccgttgaagaa
ttcccctgtaaaggtcgcggcaaccgtggcgttattgccatgacaatgtctgagcgtaac
ggtgatttggtcggcgcggtgcaggtttttgaaggcgatgacctgatgctgataagcgat
cagggcacgctggtaagaacccgcaccgatgaagtctcgcaactgggccgtaacacccag
ggcgttagggtgattcgcctgcgcgaagacgagcatttggtgggtgtgcagcgtgttgct
gaggccgatattgatgccgagctggaagaagcggaacttggtgcagaggcggtgaatgat
ggtgctgcaactgacgacgctgcaatccctaagcaaacgccagatgtgggcccagatgac
gcgccaagcgatgaccctagtgagtcttga
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