Spongiibacter sp. IMCC21906: IMCC21906_02761
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Entry
IMCC21906_02761 CDS
T03945
Name
(GenBank) Holliday junction endonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
spoi
Spongiibacter sp. IMCC21906
Pathway
spoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IMCC21906_02761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spoi03400
]
IMCC21906_02761
Enzymes [BR:
spoi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
IMCC21906_02761
DNA repair and recombination proteins [BR:
spoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IMCC21906_02761
RecFOR pathway proteins
IMCC21906_02761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
AKH70404
LinkDB
All DBs
Position
complement(2953888..2954415)
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AA seq
175 aa
AA seq
DB search
MTIILGVDPGSQKTGFGLIESDGTRHRYLSSGVIRLPQGALPPRLDIIFKSLNTIIDEFA
PDQAVVEEVFMAKSAGSALKLGQARGAAVVACVSRDLAVAEYTARQIKKAVVGSGAATKE
QVQEMVRILLALPAVPQEDAADALAAAICHANAQSGLAKMTMLPTEGRMRRGRLK
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatcttgggcgtcgacccaggttcacagaaaacaggctttgggcttattgag
agcgacgggactcgtcaccgttatttaagtagcggcgttattcgcttacctcaaggggcc
ttgcccccgcgcctggatattatcttcaaaagcctgaatacgattattgatgaatttgcc
ccggatcaggcggtggtggaagaagtgtttatggccaagagcgcgggctcggcgttaaag
ctgggacaggccagaggtgcggcagtggtcgcctgtgtgagtcgtgatttggctgtggcg
gaatatacggctcggcaaataaaaaaagcggttgtcggcagtggtgcggccaccaaagaa
caagtgcaagaaatggtgcgtattttattggcgttacccgccgtgccacaagaagatgcg
gcggatgcactcgccgcagctatttgtcatgctaatgcccaaagcggtttagcgaaaatg
acgatgctgcccacggaaggtcgaatgcgccggggcagattgaaataa
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