Spongiibacter sp. IMCC21906: IMCC21906_03118
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Entry
IMCC21906_03118 CDS
T03945
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spoi
Spongiibacter sp. IMCC21906
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spoi03016
]
IMCC21906_03118
Enzymes [BR:
spoi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IMCC21906_03118
Transfer RNA biogenesis [BR:
spoi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IMCC21906_03118
Prokaryotic type
IMCC21906_03118
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AKH70758
UniProt:
A0A0F7M996
LinkDB
All DBs
Position
complement(3318570..3319496)
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AA seq
308 aa
AA seq
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MGRRRKGRDISGILLLNKPAGRTSNSAMVVCRAIYNAAKAGHTGALDPLATGVLPVCFGE
ATKFSQFLLDADKAYRSRFIFGQNTDTADADGEVVSEADASQLTKEALEAAIDTFRGDIE
QVPPMYSALKKDGRPLYELARKGIEVERAPRPVTIRRFELESFRPGALAEAVVEVHCSKG
TYIRSLAVDLGEVFACGGHVAELHRIKAGPFDESGTVTMDTLQALRDVEDFDGLDALLIP
VERALEHIPALHLVESCAYYLRLGQAVFVANAPTEGTVTLFDEHGQFMGIGEILDDGRVK
PRRLIANM
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgggacggcgacgcaaaggccgcgatatcagcggcattcttttattaaacaaacccgct
ggccgaacctctaattcggccatggtggtttgtcgtgccatttataatgccgccaaggcg
gggcataccggcgctcttgatcctttggccacgggtgttttgcccgtctgttttggcgaa
gctaccaaattttcccaatttcttctcgatgccgataaggcttatcgcagccggtttatc
tttggtcaaaacaccgacactgccgatgccgatggtgaggtggtgagtgaggctgatgcc
tcacaactgacgaaagaggcacttgaagcagctatcgatacttttcgtggcgatattgaa
caagtgccccccatgtactcggcactcaaaaaagatggtcgccccttgtacgagctggcc
cgcaagggtattgaggttgagcgggcacctcgccctgtgacgattcgccgttttgagctt
gaatcgtttcggcccggtgccctggctgaagccgtcgtcgaggtgcattgcagcaaaggc
acgtatattcgctccttagcggtggatctgggagaggtgtttgcttgcggtggtcatgtt
gccgagctgcaccgaattaaagcggggccctttgacgagtctgggactgtcaccatggac
accttacaggcgttgcgcgatgtggaagattttgacggtttagatgccttgttgattcct
gtcgagcgcgcccttgagcatattcctgcgctgcaccttgtcgagtcttgcgcgtattac
ctccgcttaggtcaagcggtatttgtggccaacgcgcctaccgagggaacggtgacttta
tttgatgaacacggccaatttatgggaattggagaaattttagacgatggtcgcgtaaaa
cctcgtcgtttgattgcaaatatgtga
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