Sporanaerobacter sp. UW_FK_SPOR1_1: ACFWUA_02080
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Entry
ACFWUA_02080 CDS
T11243
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
spok Sporanaerobacter sp. UW_FK_SPOR1_1
Pathway
spok02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spok00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACFWUA_02080 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spok03021
]
ACFWUA_02080 (rpoD)
Transcription machinery [BR:
spok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACFWUA_02080 (rpoD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
LXG
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
XOQ17301
LinkDB
All DBs
Position
434350..435198
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AA seq
282 aa
AA seq
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MKSLAIDFLENCEINTNIKYSNRELLTSYRLKKDINARNELIINNMGLVYKAAKKRSNVN
SSFAFEDLVQEGVIGMMKGIEKFDLNKNTSFSTYIYYWITHQMDRAIMNNGRLIRLPAHI
WEKVNQINQIENENQSLNKEINPNSVPEEIKMDEKLYNDINFYRKTYNSFVSLNTTINLD
NEDSYVELQDFIPSDEPSIEEIIVEKDLKENLNKALNTLSPREKEILALRFGFNDNEPKT
LEEIGEKYHLTRERIRQIESKAINKIKCSSNKNILQEYLSCP
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtttagctattgattttttagaaaattgcgaaatcaatacgaatatcaaatac
tctaatagagaactactcacttcttatagactgaaaaaagatataaatgcaagaaatgaa
cttataataaacaatatgggtcttgtatataaagcagctaagaaaagatctaatgtaaat
tcttctttcgcttttgaagatttagtgcaagaaggagtcatcggaatgatgaaaggaata
gaaaaatttgacttaaacaaaaatactagtttctccacatacatatattattggattact
catcagatggatagagctattatgaacaatggtagactcataagacttcctgctcatata
tgggaaaaggtaaatcaaatcaatcaaatagaaaatgaaaatcaatctctaaacaaagaa
atcaacccaaactctgtacctgaagaaataaaaatggatgaaaaactatacaatgacata
aatttctatagaaaaacatataatagctttgtttccctaaataccactataaatctagac
aatgaagattcttatgttgaacttcaagacttcattccttcagatgaaccttctattgaa
gaaataattgtagaaaaagatttgaaagaaaatttaaataaggctttaaataccctatcc
cctagagaaaaagaaatattagcgcttagatttggttttaatgacaatgaaccaaaaact
ctagaagaaataggagaaaaatatcatcttacaagagaaagaataagacaaattgaatct
aaagcgataaataaaataaaatgctcaagcaacaaaaatatccttcaagaatatttaagc
tgcccttaa
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