Sporanaerobacter sp. UW_FK_SPOR1_1: ACFWUA_10615
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Entry
ACFWUA_10615 CDS
T11243
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
spok Sporanaerobacter sp. UW_FK_SPOR1_1
Pathway
spok03030
DNA replication
spok03430
Mismatch repair
spok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACFWUA_10615
03430 Mismatch repair
ACFWUA_10615
03440 Homologous recombination
ACFWUA_10615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spok03032
]
ACFWUA_10615
03400 DNA repair and recombination proteins [BR:
spok03400
]
ACFWUA_10615
Enzymes [BR:
spok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACFWUA_10615
DNA replication proteins [BR:
spok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACFWUA_10615
DNA repair and recombination proteins [BR:
spok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACFWUA_10615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
Rv2179c-like
RNase_H_2
DEDDh_C
HHH_3
tRNA_anti-codon
DUF655
T2SSK
Catalase_C
CSD
Motif
Other DBs
NCBI-ProteinID:
XOQ18929
LinkDB
All DBs
Position
complement(2126385..2130668)
Genome browser
AA seq
1427 aa
AA seq
DB search
MAKEMKLVDLINKKEIDLDLENLQNLYIRDVLLDSNARSLSLQLVSKSLVNEEELIKLQE
LLKAELPKFEDIEVNIFYDINEKDLNLIMNKYWTNLVCFIEKEIPSSSGWIRKIGWEIED
NRFILNCDSEVIFHTLKKNNIERMISEKIKKEFGINVVVVINSIAQNIDIEEFLIKSIEE
EKKLAKNISIDETSSNINNDKEIFIKKNNYVYGKNIEGDLTKLCNIDSNTGTVIVQGELF
DIESREIKGGKILFTFNVTDYTNSITVKAFIKKKDKEEFECYIKEGVFAKIEGDVVYDNY
SKSLSIILKNLNTIEKIGRKDNSIDKRVELHLHTQMSAMDGITSFSRMAKRAKEWGHSAI
AITDHGVVQSFPEGMEASKKYDLKVIYGLEGYLVNDIRSIVTNCKGKNLDTEYVVFDIET
TGFSPINDKITEIGAVKIKNGEIVDRYNQLINPEVSIPEKIVDLTGITDELVRDKPTIDN
ILPDFNNFIGDSVLVAHNASFDVGFIRQNLSKLGMDIENPILDTLELTRSLFPELKSHKL
NIVAKHLNISLENHHRAVDDAEATAQIFLKCKNILLEKGIKKLDEINTKLANNKNVYKEE
TYHVIILVKNYTGLRNLYEIVSDAHLKYFYRKPRIPKSTLLKRREGLIIGSACEAGELYK
ALLKNRDYNEIREIVNFYDYLEIQPIGNNRHLIADGMVKNEEELRDINRKILSIGKKYNK
PVVATGDVHFLDPEDEIYRRILMYGQGFKDADNQPPLYFMTTDEMLEEFSYLGEKEARKV
VIDNTNYIANLCEEIIPVPDGTFPPVIEGAEEQLRQITSNRAVEIYGDPLPTIVKERLDK
ELNSIIKNGYAVLYIIAQKLVWKSLEDGYLVGSRGSVGSSFVATMSGITEVNPLVPHYIC
PNCKYSEFIEDGSIGSGIDLPDKNCPVCGTKLRKDGHDIPFEVFLGFEGDKEPDIDLNFA
GEYQPVAHKYTEELFGKGYVFRAGTIGTIAEKTAYGFIKKYFDEKNILVHPAEINRLVKG
LTGIKRTSGQHPGGVMIVPKYKSIYDFTPIQYPADDKNSGVITTHFDYHSISGRILKLDI
LGHDVPSIIRMLEDITGVDPQGIPLDDAETMRLFTSTEPLGITSEDINSEVGTLGIPEFG
TKFVRQMLIDTRPSTFAELVRISGLSHGTDVWLNNAQDLIKNGIAKLSNVISTRDDIMLF
LIHEDLDKKRSFKIMEKVRKGKGLPEEDENYMREKGIPEWYIGSCKKIKYMFPKAHAVAY
VMMSYRIAYFKVHYPEAFYATYFTTKASDFDAELILKGKETVKNKIAELESASSDKTAKE
KNLLTVLEVVLEMYCRGFKFEKVDLYKSDSDKFIIGENGIIPPLKSLQGMGETAARNIVE
QREKGKFISVEDLMNRTKVSKPVVEVLRNHGCLDDIPDTNQLSLFNI
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagaaatgaagttagtagatctgattaataaaaaagaaattgatttagatttg
gaaaatttacaaaatttatatataagagatgtacttttggattcaaatgcaaggagttta
tcgttacaattagtttcaaaatctttagttaatgaagaagaattaattaaacttcaagaa
ttattaaaagcagagttacctaaatttgaagatattgaagtgaatattttttatgatatc
aatgaaaaagatttgaatcttataatgaataaatattggacaaatttagtttgctttata
gagaaagagattccatctagtagtggatggataagaaaaataggatgggaaatagaagac
aatcgttttattttaaattgtgatagtgaagttatatttcacactttaaagaaaaacaat
attgaaagaatgataagtgaaaaaataaaaaaagagtttggaataaatgtagtagttgtt
attaattctatagctcagaatattgatatagaggagtttttaataaaaagcatagaagaa
gaaaaaaaattagctaaaaatatttccatagatgaaactagtagtaacataaataatgac
aaggaaatattcattaaaaaaaataattatgtttatgggaaaaatatagaaggtgatttg
actaagttgtgtaatatagattcaaataccggtactgttatagttcaaggagaactattt
gatatagaatcaagggaaataaaaggtggcaaaattctttttacgtttaatgtaacggat
tatacaaattccataactgtaaaagcatttataaagaaaaaagataaagaggagtttgaa
tgttatatcaaagaaggtgtttttgcaaaaattgaaggggatgtagtatatgataattat
tctaaaagtctttcaataatattaaagaacttaaatactatagaaaaaattggaagaaaa
gataattctatagataaaagagtagaacttcatttacatactcaaatgagtgctatggat
ggaataactagtttttcacgaatggccaaaagagctaaagagtggggacacagtgcaata
gctataacggatcatggagtggtacaaagttttcctgaagggatggaagcaagtaagaaa
tatgatttaaaagtaatatatggactagaaggatatttagtaaatgatataaggtctata
gttacaaattgtaaaggtaaaaatttagatacagagtatgttgtatttgatatagaaact
acaggattttcacctataaatgataaaataactgaaattggtgctgtcaaaataaaaaat
ggagaaattgtagatagatataatcaattaatcaatccagaagtttctatacctgaaaaa
atcgtagatttgactgggataactgatgaacttgttagggataaaccaacaatagacaat
atattacctgattttaacaattttattggagattctgtattggtggcacataatgcttct
tttgatgtgggatttataagacagaacttatctaaattgggaatggatatcgaaaatcca
atattagatactttggaattaactcgtagtctatttccagaactaaaaagtcacaagtta
aatatagtggcaaaacatttaaacataagtttggaaaatcatcatagggccgtagatgat
gcagaggctactgcccaaatatttttaaaatgtaaaaatattttattggaaaaagggatc
aaaaaattagatgaaataaatacaaaattagcaaataacaagaatgtatataaagaagaa
acttatcacgtaataatattggttaagaattatacaggattgagaaatctttatgaaata
gtgtctgatgctcatttaaaatatttttatcgaaagccaagaattcccaaatcaactctt
cttaagcgcagagaaggattaataattggaagtgcttgtgaagcaggtgaactttacaaa
gctttattgaagaatagggattacaatgaaataagagaaattgtcaacttttatgattat
ttggagatacaaccaataggtaataatagacatttaatagcagatggtatggtaaaaaac
gaagaagaattgagagatatcaatagaaaaattctatctataggtaaaaaatataataag
cctgttgttgcaactggtgatgttcattttctagacccagaagatgaaatttatagaaga
atacttatgtatggtcaaggatttaaagatgcagataatcaacctccactttatttcatg
actacggatgaaatgctagaagaattcagctatctaggagaaaaagaggcaagaaaagta
gttatagataatactaattatatcgctaatttatgtgaagaaataattcctgtccctgat
ggtacttttcctcctgtcattgaaggagcggaggaacaattgagacaaataactagtaat
agagcagtagaaatatatggcgatccacttccgacaattgttaaagaaaggcttgacaaa
gaattaaactctattattaagaatggttatgccgtattatatataattgctcaaaaatta
gtttggaaatcattagaagatggatatttggtaggatcaagaggttcagtaggttcttct
tttgttgcaactatgagtgggattactgaagtaaatccattagtccctcattatatatgt
ccaaattgtaaatatagtgagttcatagaggatggttcaataggttccggaattgattta
cctgataaaaattgtcctgtatgtggtacaaaattaagaaaagatggtcatgatatacct
tttgaggtttttcttggatttgaaggagataaagaacctgacatagatttaaactttgct
ggagaatatcaaccagtagcacataaatatactgaagagctctttggaaagggatatgta
tttagagcaggaactattggaactatagcagaaaaaacagcttacggatttataaaaaaa
tattttgatgaaaagaacatattggtgcatccagcagaaatcaacagattagttaaaggg
cttacaggcataaaaagaacttcaggacaacatccaggaggtgtaatgatagtaccgaag
tataaaagtatatatgattttacacctattcaatatcctgcagatgataaaaattctggg
gtcataactactcactttgattatcattcaattagtggtaggatattgaaacttgacata
ttaggacatgatgtcccatctatcataagaatgcttgaagatataactggtgttgatcca
cagggaattccattagatgatgctgaaacgatgaggttatttactagtacagaaccatta
ggaattactagtgaggatataaattcagaagtgggtacattaggcattcctgaatttggt
acaaaatttgtaagacaaatgctcatagatactaggccttcaacttttgcagaattagta
agaataagtggactttctcatggtaccgatgtttggttaaataatgctcaggatttaata
aaaaatggaattgcaaaattgagcaatgtaatttctacaagagatgatatcatgctattt
ctcattcatgaagatcttgataaaaaaagatcattcaaaataatggagaaggtcagaaag
ggcaagggattacctgaagaggatgaaaattatatgagagaaaaaggtatcccggaatgg
tatatagggtcttgtaaaaaaataaaatacatgtttcctaaagctcatgctgtggcttat
gtaatgatgtcttatagaattgcttattttaaagttcattatcctgaagctttctatgca
acatattttacaactaaggcaagtgattttgatgctgaactcatacttaaaggtaaagag
actgtaaaaaataagattgcagaattagagtctgcatcttcagataaaactgctaaagaa
aaaaatcttttaacagtattagaagtggttttagaaatgtattgtagaggatttaaattt
gaaaaagtagatttatataaatcagatagtgataaatttattattggagaaaatgggatt
ataccacctttaaaatcgttgcaaggtatgggtgaaactgctgctagaaacattgtagag
caaagggaaaaaggaaagtttatttctgttgaagaccttatgaatagaactaaagttagt
aagcccgttgttgaagtgttaagaaatcatggttgccttgatgatataccagatacaaat
caacttagcctatttaatatttga
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