Sporanaerobacter sp. UW_FK_SPOR1_1: ACFWUA_11300
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Entry
ACFWUA_11300 CDS
T11243
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spok Sporanaerobacter sp. UW_FK_SPOR1_1
Pathway
spok03410
Base excision repair
spok03430
Mismatch repair
spok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACFWUA_11300 (recJ)
03430 Mismatch repair
ACFWUA_11300 (recJ)
03440 Homologous recombination
ACFWUA_11300 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spok03400
]
ACFWUA_11300 (recJ)
DNA repair and recombination proteins [BR:
spok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACFWUA_11300 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACFWUA_11300 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACFWUA_11300 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
XOQ19063
LinkDB
All DBs
Position
complement(2248479..2250956)
Genome browser
AA seq
825 aa
AA seq
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MIRFDKVYKLYDKDYSQIDTLCRRLDISPLTAKVLINRGFNTIESCEDFLNTDLKNLNDP
FLLKGMKEAVERISKAIESSEKICIYGDYDADGVTSTSILFIFLKKLGANCFYYLPNRLE
EGYGLNIDAIDNIAKLNTSLLITVDCGITNICEVDYLNEKGIDVIVTDHHQCIDTLPKAV
SVINPNRVDCSYSFKMLAGVGVAFKLIQGLSKKLGIEVDYEEILPLVTIGTVADVVPLVG
ENRIIVKNGLNFMKDTSNLGVKALLEVSGLKDKNISSYHVGFVLGPRLNAGGRLGVATIG
VKMFTTDDYSEALSLAEYLDEENRKRQEIEEEILKDAEKLIEEKIDLEKEKVIVLASDKW
HSGVIGICASKITDKYFKPSILFSIEGDVARGSARSIPTFDIHNSLSRCSDVLEKFGGHK
QAAGMLIKTQNINEFRRKINEVADEFLDEDDLIPEIYIDSELESSDIDIKTISELKKLEP
FGMNNPSPQFIYRTAKIKSIRQIGKDNAHLKLLLEKNGSVVDTIGFNFGDYGNVLSNEDE
INIVGNLDINDYMGNVSPQLIIREINWIKYDIPNIDDEYYYALKKYLKKNSLNFKKGKKN
VEFVEKINRLDYIVDVLKERENVLVLVYNYVNILSICEAIQLEGRDVIKKTSISYNIDDN
HKVNSIVILPVLFDINFKRYEKVIFYDLSFDVNNFLYFMDKIGPKNVGTLFHRYDIDLNK
EILLNILPTIDEMRIIYKSFLTAKSKNIKIEPYLYLESINCKVEKKITKYKLDVTMEIFK
DLNFIDFTLKDNYYFVKILEPPNEKIDILEKPKVKYLYSLKNSEM
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgataagattcgacaaggtatataaattatatgacaaggattattctcaaatagatacc
ttgtgtagaagattagatatttctccacttactgcaaaggtgttgataaatagaggtttc
aatacaatagaaagttgtgaggattttttaaatactgatttaaaaaatttaaatgatcct
tttttattaaaaggaatgaaagaagctgttgagagaatatctaaggctattgaatctagt
gaaaaaatatgtatttatggagattatgatgctgatggagttacaagcacatctatatta
tttatttttttaaaaaaacttggtgctaattgtttttattatcttcctaatagattagag
gagggatatggtttaaatatagatgccatagacaatatagctaaattaaatacttctctt
cttataacagttgattgtggtataacaaatatttgtgaggtagattatttaaatgaaaag
ggaattgatgtaatagttacagatcatcatcaatgtatagatacattacctaaagcagtt
tcagttataaatcccaatagagtggattgttcctactcttttaaaatgttggcaggtgta
ggagttgcatttaaactcattcaaggtttgtcaaaaaaacttggtattgaagtagattat
gaggaaatattgcctttagtcactattggaactgtagcagatgtagtgcctttagtagga
gaaaataggattatagttaagaatggtttgaattttatgaaagatacatctaatttaggg
gtgaaagctcttttggaagtatcaggtcttaaagacaaaaatatatcatcatatcatgta
gggtttgtattggggcccagattgaatgcaggtggaagattaggagtagctactataggt
gttaaaatgtttactacagatgattatagtgaagctttgtcccttgcggagtatttagat
gaagaaaacagaaaaagacaggaaatagaagaagaaatattaaaggatgctgagaaatta
atagaagaaaaaatagatttagaaaaagaaaaggttatagttttagcttctgataagtgg
cactctggtgttataggaatttgtgcttctaagataacagataaatatttcaaaccttct
atattgttttctatagaaggtgatgtagctcgaggttctgctagaagtattccaaccttt
gatatacataatagcttaagtagatgtagtgatgtgttggagaaatttggtgggcacaaa
caagctgctgggatgcttataaaaacacaaaatataaatgaatttagaagaaagataaat
gaagttgcagatgagtttttagatgaggatgatttgataccagagatatacatagattct
gaacttgaatctagtgatattgatataaaaaccataagtgaattgaaaaaattagagccc
tttggtatgaataatccttctcctcaatttatttatagaactgcaaagataaagagtatc
aggcaaataggtaaagataatgcacatttaaagttgttgttagaaaaaaatggttcagta
gttgacactatagggtttaattttggggattatggaaatgttttaagtaatgaagatgaa
ataaatattgttggaaatttggatataaatgattatatgggaaatgtaagtccgcaattg
ataattagagaaataaactggatcaaatatgatatacctaatatagatgatgagtattat
tatgccttaaaaaaatatttaaagaaaaatagtttgaattttaagaaaggcaaaaaaaac
gttgaatttgttgaaaaaataaatagattggattatattgttgatgttctaaaagagcgt
gaaaatgtgttagttttagtttataattatgtaaatattttaagtatctgtgaagctatt
caattggaaggcagagatgtaataaagaagacatcgatttcttataatattgatgataat
cataaggtgaacagtatagttattcttcctgtactatttgatattaattttaaaagatat
gaaaaggtaatattttatgatttgagttttgatgttaataattttctatattttatggat
aagataggaccaaagaatgtaggaacactttttcatagatatgatatagatttaaacaaa
gaaatattattaaatatattgccaactatagatgaaatgagaattatatataaatcattt
ttaacagcaaagagtaagaacataaaaattgaaccttatttatatttggaatctattaat
tgtaaagtagaaaaaaaaatcacaaagtataaattggatgtaaccatggagatatttaaa
gatttaaattttatagattttactttgaaagataattattattttgttaaaattttagag
ccacctaatgaaaaaattgacatattggaaaaacctaaagtaaaatatctatatagctta
aaaaatagtgagatgtag
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