Shewanella polaris: FH971_00065
Help
Entry
FH971_00065 CDS
T06579
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
spol
Shewanella polaris
Pathway
spol00071
Fatty acid degradation
spol00280
Valine, leucine and isoleucine degradation
spol00310
Lysine degradation
spol00362
Benzoate degradation
spol00380
Tryptophan metabolism
spol00410
beta-Alanine metabolism
spol00640
Propanoate metabolism
spol00650
Butanoate metabolism
spol00907
Pinene, camphor and geraniol degradation
spol00930
Caprolactam degradation
spol01100
Metabolic pathways
spol01110
Biosynthesis of secondary metabolites
spol01120
Microbial metabolism in diverse environments
spol01200
Carbon metabolism
spol01212
Fatty acid metabolism
Module
spol_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
FH971_00065 (fadB)
00650 Butanoate metabolism
FH971_00065 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
FH971_00065 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
FH971_00065 (fadB)
00310 Lysine degradation
FH971_00065 (fadB)
00380 Tryptophan metabolism
FH971_00065 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FH971_00065 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
FH971_00065 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
FH971_00065 (fadB)
00930 Caprolactam degradation
FH971_00065 (fadB)
Enzymes [BR:
spol01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
FH971_00065 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
FH971_00065 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
FH971_00065 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
FH971_00065 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QDE29502
UniProt:
A0A4Y5Y9N4
LinkDB
All DBs
Position
complement(16798..18948)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAQGSVNKFDRETLASLDAALDSIKQNTKVKALMLTSA
KSTFIVGADITEFLSLFKQDDATLLTWVEQANAVFNKLEDLPFPTISAVNGFALGGGFET
ILATDLRVVDTNTRIGLPETKLGIIPGFGGTVRLPRIIGADNALEWITSGKDQRPADALK
VGAIDAVVAPEDLEASAIQMLKEALDGSIDWQARRTLKQSPLMLPKLEALMCFSTAKGMV
FSVAGKHYPAPMAAVNVVEQAAGLGRDDALKVEAQAFIKLAKTEVAQALIGIFLNDQYVK
AKAKKAGKLAHDVNQAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLNEAAKIL
TVQVARGRSTPEKMAKVLNHITPSLDYAAIKNSDIVVEAVVEHPKVKATVLAEVEQYVSE
DAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEIIRGERSSEETIATVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLAEGADFAAVDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFENKRLGQKNAKGFYAYSVDRRGKP
KKDIDPVSYELLSAEFGELKAFESDDIIARCMIPMIIETVRCLEEGIIASPAEGDMGLVY
GIGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRELAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagccctactattcaggttgagttacttgaagataatattgccaagttg
tgttttaacgcacaaggttcggtaaataaatttgacagagaaactctagcctcacttgat
gcagccttagatagcatcaaacaaaacaccaaggttaaagccttaatgctgacatcagca
aaaagcacctttatcgttggcgcagacatcaccgaatttttaagtttatttaagcaagat
gatgcaacactgctcacatgggttgaacaagccaatgcagtattcaacaaacttgaagat
ttaccttttccaactatctctgccgttaacggttttgctcttggtggtggtttcgaaact
attttagccactgacttacgtgttgttgataccaatacacgtattggattacctgaaacc
aaactaggtatcattcctggcttcggtggcacagtgcgtttacctagaattatcggcgct
gataatgcacttgagtggattacctcaggtaaagatcaacgaccagcagacgcattaaaa
gttggcgctattgatgccgttgtagctccagaagatttagaagcttcagcaattcaaatg
ctgaaagaagcacttgatggcagcatcgattggcaagctcgtcgtaccctaaagcaatca
ccattaatgctacctaaactagaagccttgatgtgttttagcaccgctaaggggatggta
ttctctgttgcaggcaaacattatccagcacctatggctgctgtgaatgttgttgaacaa
gctgcaggtttaggtcgtgatgatgcattaaaagtggaagctcaggctttcattaaatta
gctaaaacagaagttgcccaggcattaattggtattttcttaaatgaccagtacgttaaa
gctaaagcaaagaaagcgggtaaattggctcacgatgttaaccaagcagctgtattgggt
gctggtataatgggtggtggtattgcataccaaagtgcaagtaaaggcacgccaatcgtg
atgaaagacatcgcgcaacctgcacttgatttaggtttaaatgaagcggcgaagatactg
acagttcaagtagctcgtggacgttctacgccagaaaaaatggcaaaagttctcaaccac
atcactccttcactcgattatgctgccattaaaaatagcgatattgtagtagaagcggtt
gttgaacatccaaaagtgaaagcaacagtgctagctgaagttgaacaatatgtatctgaa
gatgccattattgcatcaaacacttcaactatctcaatcaacttattggctaaaagcctt
aagaaacctgaacgcttctgcggtatgcacttctttaatccagtgcacaaaatgccatta
gttgaaattatccgtggtgagcgcagctctgaagaaaccattgcaaccgttgttgcgtat
gcaagcaaaatgggtaaaaccccaattgtagtaaacgattgtccgggcttcttcgttaac
cgcgtattgttcccatactttgcaggctttagtggtctactcgcagaaggcgctgatttt
gcggctgtcgataaagtcatggaaaaacagtttggctggccaatgggtccggcttactta
cttgacgtagttggtttagataccggtcatcatgcacaagcagtaatggcagaaggcttc
cctgatcgcatgggtaaaaacggcaaagacgcaattgatataatgtttgaaaacaagcgt
ctaggccagaagaatgccaaaggtttctatgcttattctgttgaccgtcgtggtaagccg
aaaaaagacattgatccagtaagctatgaattattaagcgctgagttcggtgaattaaaa
gcattcgagtcagatgacatcatcgctcgttgtatgatcccgatgatcatcgaaacagtt
cgttgtttagaagaaggcattattgcatcacctgctgaaggcgatatgggtctagtttac
ggtattggtttccctccattccgtggcggtgtattccgttacttagacaccatgggcgta
gcaaactttgttgccctagcagacaaatatgcacaccttggtggtttatatcaagtaacc
gatgcgatgcgtgaacttgcagccaacaacggtagttactaccaagcctaa
DBGET
integrated database retrieval system
