Shewanella polaris: FH971_01280
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Entry
FH971_01280 CDS
T06579
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
spol
Shewanella polaris
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spol03021
]
FH971_01280 (rpoH)
Transcription machinery [BR:
spol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FH971_01280 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Fe_dep_repress
UCR_14kD
GntR
Motif
Other DBs
NCBI-ProteinID:
QDE29715
UniProt:
A0A4Y5YAM8
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All DBs
Position
294272..295129
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AA seq
285 aa
AA seq
DB search
MTYQTQSMALAVPHNASSLEAYIQSVTSINMLDADTEYDIAKRLQENGDLQAAKQLIMSH
LRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPNVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNIRKSKKRLGWFSDAEVTMVAENLGVSKADVTEMESRMAA
QDPAFDLTNDSDDDHHDFAPALYLEDHSSDVADQVEHADWEADSQTRLLSAIKTLDERSQ
HILRARWLDDTKVTLQELASTYEVSAERIRQLEKNAMNKLKSCME
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacttatcaaacgcaatcaatggctctagctgttccgcataatgcaagcagtttagaa
gcgtatatccagtcagtgaccagcatcaatatgttggacgccgatactgagtatgacatc
gccaagcgtttacaagaaaatggtgatctacaagctgcaaagcaattaattatgtcgcat
cttcgttttgttgtacatgtggcgaaaggttattctggatacggtttaccgcaggcagat
cttattcaagaaggtaacattggtttgatgaaagcggttaaacgctttgatcctaatgtc
ggtgttcgtcttgtgtcttttgcagtgcattggattaaggcagaaattcatgaatacgtg
ttgaaaaactggcgtatcgtgaaagtggctaccaccaaagcacagcgtaaattatttttt
aatatccgtaagtctaaaaagcgtttaggttggttcagcgacgctgaagtgaccatggtg
gctgaaaacctaggggtatcgaaagcagatgtaaccgaaatggaatctcgaatggcagcc
caagatcctgctttcgatttaaccaatgacagcgacgatgatcaccatgattttgcccca
gcattatatttagaagatcattcttctgatgtggcagatcaagttgaacacgccgattgg
gaagccgattctcaaacacgtttattatcagcaatcaaaacgttagacgaacgtagccag
catatattacgtgcgcgttggttagatgatactaaagtgactttgcaggagctcgcatcg
acttatgaagtctctgctgagcgaattagacagctagaaaagaatgccatgaacaagctt
aaatcttgtatggagtaa
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