Shewanella polaris: FH971_02070
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Entry
FH971_02070 CDS
T06579
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
spol
Shewanella polaris
Pathway
spol02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FH971_02070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spol02000
]
FH971_02070
02044 Secretion system [BR:
spol02044
]
FH971_02070
Transporters [BR:
spol02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
FH971_02070
Secretion system [BR:
spol02044
]
Type I secretion system
Adhesin protein transporter
FH971_02070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
Peptidase_C39
SMC_N
AAA_15
AAA_29
DUF87
MMR_HSR1
AAA_13
AAA_23
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDE29858
UniProt:
A0A4Y5YBC5
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Position
complement(465644..467821)
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AA seq
725 aa
AA seq
DB search
MPATVSNHQEQWAISASQRVTVDPLLDSLVLLTEHFGSPCSIDSLAAGLPLSGAVITPEL
LPQAAARAGLSAKLTRKDLNQISDILLPCILLLKDKKACILREINLEQDKAVIQLPETGG
EETLTIEGLETLYVGYLFLVKQDYRGDKSFDVHLHDNSSHWLLQSIKDSAPIYRDALIAS
VLVNLFALVSPLFIMNVYDKVVPNLAFESLWVLAIGASIAYIFDFIMRQLRSYLIDVAGK
KVDIIVSSKLFAKAIGIPLSKRSPSVGGMARQLGEFDSIREFLTSATITALVDLPFALLF
VIIIYIVAGDLALIPVIGSVIIIAITLYLQPKLKQAIEESNRFASLKHGHLIESLSALES
IKANGAEGLVQKSWQQMIGHTANWQLKTKKLSNYISHSASFIVQLTVVSVVILGVYRLAD
NEISMGGIIAAVMLSSRAIAPMAQLAGLITRGNHTISSLRQLDAIMGQEDEFEDKGHLAS
KERFMGKIEADNISFSFPGSEKPSLHPLSLRINPGERIAIIGRNGSGKSTLAKLLLGLYK
PTQGSLRYDGLDVGQIHPSDLRRNFGYLPQDVTLFHGSIRDNILFGSRQVTEHQLMRAIQ
LSGVSLFTNLESEGLDQQVGEGGLALSRGQRQTVALARATLNDPSILLMDEPTASLDARA
EKQFIRSMQLVSRDRTLLLITHKMHLLNLVDRIIVLDKGHLMADGPKEDILAKLNSGAIF
GGQNS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtgccagcaactgtgtctaaccatcaagaacaatgggcaatttcggcatcgcaacgagta
acagtcgatccgctgctagatagcctagtgttattaacagaacactttggcagcccatgc
tcaattgattcattggccgcaggtcttccgttatcaggcgcggttattacccctgaacta
ctgccacaagctgcggctcgagcgggattgtcagcaaaattaacccgaaaagacctcaac
caaatctcagatattttgctgccttgtatcctattactaaaggataaaaaggcctgtatt
ttaagagaaataaatctagaacaagataaagccgttattcaattacctgaaacaggtggc
gaagagaccctgaccattgaaggcttagaaaccctatatgtaggctatctatttttagtc
aaacaagattaccgtggtgataagagttttgatgttcaccttcatgacaatagcagccat
tggttattacaaagcattaaagactctgcgcccatttatcgcgatgctcttatcgcctca
gttttggttaatttatttgcattagtatcaccactattcattatgaatgtgtatgacaaa
gtcgtgcctaaccttgcatttgagtcactgtgggtattggccattggggcaagtattgcc
tatattttcgattttatcatgcgccaattaagaagttatttaattgatgtggcaggtaaa
aaagtcgacattattgtttcgtcaaaattattcgccaaagccattggtattccgttatca
aaacgttcacccagtgtaggtggaatggctcgacaattaggtgaatttgacagcatccgt
gagtttttaacatcagcaaccattactgcactggttgatctcccctttgccttgttattt
gtcattattatctacattgttgcaggagatttagcgctaattccagtaattggtagcgta
atcattattgcaataactttgtatttacagccaaaattaaaacaagctattgaagaaagc
aatcgttttgccagtttaaaacatggtcatttgattgaaagtctatcagcgttagaatca
atcaaagccaacggcgctgaaggcttagtacaaaaaagctggcaacaaatgataggtcac
actgcaaattggcaactcaaaacaaaaaaactgtctaattatatcagtcatagcgcaagc
tttatcgtacagctgacggtagtatcagtcgttattttgggtgtatatcgtctggcagat
aacgaaatatcaatgggcggcattattgcagccgtcatgctctctagcagagctatcgca
cctatggctcagctagctggcttaataacccgcggtaaccatactattagctcattacgt
caacttgacgccattatggggcaagaagatgagtttgaggataaaggacatttagccagt
aaagaacgatttatgggtaaaatagaagcggataatatcagcttcagctttcccggttca
gaaaaaccaagtctgcatcctctatctctacgtataaatcctggagaacgtatcgccatt
attggtcgaaatgggtcaggtaagagtacgttagccaagctattactcgggttatataaa
ccaactcaaggtagcctgcgttatgacggtcttgatgtcggacaaattcaccctagcgac
ctgagacgtaactttggttacttaccccaagatgtcaccttatttcatggttctatccgc
gacaatattttatttggctctcgccaagtcactgaacatcagttgatgagagcgattcag
ctttcaggagtaagcttgtttaccaatttagaatctgaaggtttggatcaacaagttggt
gaaggtggattagcgctaagtcggggacaaagacaaaccgttgccctagcacgagcaacc
ctaaatgatccttcgatactcttaatggacgaacctactgcaagccttgatgctcgagca
gaaaaacaatttattcgttcgatgcagttagtcagtcgcgatagaactttattattaatc
actcataaaatgcatctgctcaatttagttgatcgtattattgtactcgataaaggccac
ttgatggccgacggacctaaagaagacattcttgcaaaactcaactctggagcaattttt
ggaggtcagaattcatga
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