Shewanella polaris: FH971_02140
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Entry
FH971_02140 CDS
T06579
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
spol
Shewanella polaris
Pathway
spol00300
Lysine biosynthesis
spol00470
D-Amino acid metabolism
spol01100
Metabolic pathways
spol01110
Biosynthesis of secondary metabolites
spol01120
Microbial metabolism in diverse environments
spol01230
Biosynthesis of amino acids
Module
spol_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FH971_02140 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FH971_02140 (dapF)
Enzymes [BR:
spol01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FH971_02140 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-ProteinID:
QDE29871
UniProt:
A0A4Y5YAS4
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All DBs
Position
492958..493785
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AA seq
275 aa
AA seq
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MIHFTKMHGLGNDFMVVDGVTQNVFFSSEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFH
YRIFNADGSEVEQCGNGARCFARFVRNKGLTQKNKIRVSTNSGKITLRIERDGNVTVNMG
VPIIEPSQIPFKAKKSEKTYLLQTPMQTYLCGAISMGNPHCVIEVEDVQNVAVDEIGSIL
TRHERFPKGVNVGFMQVLTPGHIKLRVYERGAAETLACGTGACAAAAVGQLQDKLNKQVR
VDLPGGSLLINWEGEGKPLWMTGPAEHVYDGQIQL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtgatccatttcactaagatgcacggactgggtaatgattttatggtcgttgatggcgta
acacaaaatgtgtttttttcgtctgagcaaatccgccgtcttgccgatcgtaattttggc
attggttttgatcaactactgttggttgagccaccttacgatccagatttagatttccat
tatcgtatttttaacgccgatggcagtgaagttgaacagtgtggtaatggcgcccgctgt
tttgctcgttttgttcgtaataaaggcttaactcaaaagaataaaattcgcgtgagtaca
aactcaggcaaaattaccttacggattgagcgtgatggcaacgtgaccgtcaatatgggc
gtacccattatcgaaccgagccaaattccgtttaaagctaaaaaaagtgaaaaaacatat
ttactacaaaccccaatgcaaacttatttgtgtggtgccatttctatgggcaatccacac
tgtgttattgaggttgaagatgtgcaaaacgtggccgttgatgaaataggcagtatatta
actcgtcacgaacgcttccctaaaggcgtgaatgtcggctttatgcaagtgttaacacct
gggcatattaaattgcgggtgtatgaacgtggtgcagcagaaaccttagcttgtggcact
ggagcgtgtgctgctgctgcggtcggacaattacaagataagcttaataaacaggtaaga
gttgacttacctggtggcagcttattgattaattgggaaggtgagggcaaacctctgtgg
atgactggaccggcagaacacgtatacgacgggcaaatacaattatga
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