Shewanella polaris: FH971_03790
Help
Entry
FH971_03790 CDS
T06579
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
spol
Shewanella polaris
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spol01011
]
FH971_03790
Enzymes [BR:
spol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FH971_03790
Peptidoglycan biosynthesis and degradation proteins [BR:
spol01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FH971_03790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
QDE30171
UniProt:
A0A4Y5YBK7
LinkDB
All DBs
Position
complement(885306..886118)
Genome browser
AA seq
270 aa
AA seq
DB search
MAINYRFILLIIFSSIFLISCSSNDAKTSPSGKKSRYQMANDRYPDDAPDVSLVKNAQPK
YEPYSRQGNRDYTVLGKSYKVLDSGKGFKEQGNASWYGSKFHGHLTSSGETYDMYTMSAA
HKNLPIPSYVKVTNLDNNKQIIVRVNDRGPFHHGRVIDLSYAAAYHLGMLAKGTAKVALE
TIYIPSAEARAISDLTDNENHFIQVAASQNILSINMLAKQLETQYAVTSRVTSINGMHRL
QLGPIRQIHLTNELLDRIQSNGYPQSFIVP
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggccattaattaccgtttcatcttgttaatcattttcagcagcatattccttataagc
tgttcgtctaatgacgcaaagacatctccttctgggaaaaaaagtcgctatcaaatggct
aatgaccgctatcctgatgatgcgccagatgtcagtttggttaaaaatgctcaacccaaa
tatgagccttatagcagacaaggtaatcgtgattacactgtattaggtaaaagctataaa
gtgctagacagtggcaagggattcaaagagcaaggtaatgcatcatggtatggatcaaag
tttcatggtcatttaacatcaagtggcgaaacttacgacatgtacactatgtctgcggca
cataaaaacttaccgataccaagctatgtcaaagtcaccaatttagacaataataagcaa
attattgtccgggtaaatgaccgtggaccgtttcatcatggccgagtgatagacctctct
tatgcagcggcttatcatttaggcatgctcgccaaaggaaccgcaaaagtagcacttgag
accatttatattccctctgcagaagcgcgagcgataagcgacttaacagataatgagaat
cactttattcaagttgctgcatctcaaaacatattaagtatcaatatgctggcaaagcaa
ctagaaactcaatatgcggtgacctctcgcgtcacctcgataaatggtatgcacagattg
caattgggtcctattcgacaaatccatctaactaatgaattgctagatcgtattcaatca
aatggctatccgcagagttttatcgtaccgtaa
DBGET
integrated database retrieval system
