Shewanella polaris: FH971_03975
Help
Entry
FH971_03975 CDS
T06579
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
spol
Shewanella polaris
Pathway
spol00541
Biosynthesis of various nucleotide sugars
spol01100
Metabolic pathways
spol01250
Biosynthesis of nucleotide sugars
Module
spol_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FH971_03975 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spol01005
]
FH971_03975 (kdsA)
Enzymes [BR:
spol01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
FH971_03975 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
spol01005
]
Lipid A
FH971_03975 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QDE30200
UniProt:
A0A4Y5YBN8
LinkDB
All DBs
Position
918694..919545
Genome browser
AA seq
283 aa
AA seq
DB search
MDQKIIQLSNNVQVGNDKPFVLFGGMNVLESRDLAMSIAEHYVEVTQKLGIPYVFKASFD
KANRSSINSYRGPGMEEGLRIFEEIKSTFNVPMITDVHEIEQCAPVAEVVDIIQLPAFLA
RQTDLVVAMAKTGAVINVKKPQFLAPHEMRHIITKFNEAGNDNIILCERGSSFGYNNLVV
DMLGMDEMKQTGYPVIFDATHALQRPGGRADSAGGRRAQATELARSGMALGLAGLFIEAH
PDPDNAKCDGPCALPLHLLEKYLTQMKAVDDLVKSFEFIDTSK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaaaattattcagttatctaataatgttcaagtaggcaacgataaaccgttt
gtgttatttggtggtatgaacgtacttgagtcgcgtgatttggcgatgtcaattgcagaa
cattatgtggaagtgacccaaaaattgggtatcccctatgtattcaaagcctcttttgat
aaagccaatcgttcatcgattaattcataccgaggtccaggtatggaagaaggtttacgt
atttttgaagaaataaaatcaacctttaatgtgcctatgattaccgatgtacacgagatc
gaacagtgtgcacctgttgctgaagtagtcgatattattcaattacctgcattcttagct
cgtcaaactgatcttgttgtcgctatggcaaaaactggcgcagttattaacgtgaaaaaa
ccacagtttttagcgccgcacgaaatgcgacacattattaccaagtttaacgaagccggt
aatgacaacattattttatgtgaacgcggcagtagctttggttataacaacctagttgtt
gacatgttaggcatggatgaaatgaagcaaacaggttatccagtgatctttgatgcgact
catgcactgcaacgacctggtggacgtgcagattctgctggcggacgtcgtgcgcaggca
actgaactagcaagaagtggtatggcattagggttagcgggcttgtttattgaagctcat
ccagatcctgacaatgcaaaatgtgacggtccatgcgcactaccgctgcatttattagag
aaatacctaacgcagatgaaagcagttgatgatttggttaagtcatttgagtttatcgat
accagcaagtaa
DBGET
integrated database retrieval system
