Shewanella polaris: FH971_04400
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Entry
FH971_04400 CDS
T06579
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
spol
Shewanella polaris
Pathway
spol02020
Two-component system
spol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FH971_04400
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FH971_04400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
spol02022
]
FH971_04400
02035 Bacterial motility proteins [BR:
spol02035
]
FH971_04400
Two-component system [BR:
spol02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
FH971_04400
Bacterial motility proteins [BR:
spol02035
]
Flagellar system
Flagellar assembly proteins
Others
FH971_04400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
AAA_2
AAA_16
AAA_19
AAA
AAA_22
MCM
Motif
Other DBs
NCBI-ProteinID:
QDE30278
UniProt:
A0A4Y5YCH6
LinkDB
All DBs
Position
1005887..1007182
Genome browser
AA seq
431 aa
AA seq
DB search
MDNLTIRLVDFELSKSTKISLEHQGFKLWQTGQELPWLTIINLSQYQPTALAQHLKQFPS
KNYLALLAPEQGELAATAMQIGVQDYLLLPLEDNPLFSSIERLHRLEQPDSQIIAAAPIS
KQLLMLAHRAASTEASILLTGESGTGKEPLANYIHRHSSRAGKPFVAINCAAIPETMLES
ILFGHTKGAFTGASADKAGKFEQANGGTLLLDEIAEMSLILQAKLLRVLQEREVERLGGN
QSITLDIRVIASTNKDLRMAVDAGEFREDLFYRLDVLPLKIAPLRERKADVLPLAEHFLQ
YYGQHDITTYFSPQAQHALIDHDWPGNVRELENCIQRGLMMRRGQTIQAIDLGFTLVPES
CANNSTQGLKQSKRQAEFQFIVDILRKVQGSRSQTAAELGMTTRALRYKLVQMRDAGIDV
DQLLQRSGNAA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggataacctaacgatacgtcttgtcgattttgagctgtctaaatcgacaaaaataagt
cttgaacaccaaggttttaaactttggcagacagggcaagaactgccttggcttaccatc
attaatttatcgcaatatcaaccaacggcgcttgctcagcatttaaaacagttccccagt
aaaaactatcttgcattgttagccccagaacaaggagagttagctgctactgcaatgcaa
attggtgtgcaagattatctattactcccattagaagataacccattattttcatcgatt
gaacgtttacatcggcttgaacaacccgactcacaaattattgcagcggcaccaatcagc
aagcaattactgatgctcgcgcacagagccgcttctacagaagccagcattctattaaca
ggggaaagtggtacaggtaaagaaccattagctaattatattcatagacattcaagtaga
gcgggcaaaccgtttgtggctattaattgtgcggcaattcctgaaactatgcttgagtcc
attctatttggtcacacaaagggagcttttaccggagcgagtgcagataaagccggtaaa
ttcgaacaagctaatggtggtacgttattattagatgaaatagctgaaatgtctttgatt
ttacaagctaaattattaagggtactccaagaaagagaagttgagcggttaggagggaac
caatctataacgcttgatataagagtgatcgcatctaccaataaagacttaagaatggcg
gttgatgctggagagtttcgtgaggatttattttaccgccttgatgtattgccattaaaa
attgctcctcttagagagaggaaggctgatgttttgcctctagctgaacatttcttacaa
tattacggtcagcacgatattactacatattttagccctcaagcacaacatgcgctgata
gatcatgattggcctggtaatgtaagggaacttgaaaattgtattcaacgtggacttatg
atgcgccgcggacaaactattcaagcaatagatcttggatttactttagtgccagagagt
tgtgctaataacagcacacaagggctaaaacagtcaaaacgccaagcagaatttcaattt
attgttgatattctgcgtaaagttcagggtagtcgcagtcaaaccgctgcagaactgggt
atgactactcgggcattaagatacaagttagtgcaaatgcgtgatgcaggtatcgatgtc
gatcaattattacaacgctcaggcaatgccgcttaa
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