Shewanella polaris: FH971_04550
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Entry
FH971_04550 CDS
T06579
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
spol
Shewanella polaris
Pathway
spol02020
Two-component system
spol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FH971_04550
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FH971_04550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spol03021
]
FH971_04550
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spol02035
]
FH971_04550
Transcription machinery [BR:
spol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FH971_04550
Bacterial motility proteins [BR:
spol02035
]
Flagellar system
Flagellar assembly proteins
Stator
FH971_04550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
RuvB_C
Motif
Other DBs
NCBI-ProteinID:
QDE30304
UniProt:
A0A4Y5YCA4
LinkDB
All DBs
Position
1034487..1035200
Genome browser
AA seq
237 aa
AA seq
DB search
MSCDGQLAYQAVSDEPVLQRLSEEQLIVQYLPLVKRAVLQLRSHCGAMLSLEDMEQIGMM
ALIESSRRYPGEFDNGFISFAGQRIRGAILDELRRQDWRPRPVRQQAHKLNDKVRELTRA
FGREPTDSEVAQGLDLSQEDYRQSLYATQAESMKSLDDMLSIGEQPADKNNEVERFLLKK
TLIKAMTKLNEREQLILSLYYNHELNLKEIALTLGLTETRICQLHKLAVARLESLLQ
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtgatggtcaattagcctatcaagctgttagcgatgagccagtactacagcgt
ttgtccgaagagcagcttattgtgcaataccttcctttggttaagcgagcagtactgcag
ctgcggagtcattgtggggctatgttatccctagaggacatggaacaaataggtatgatg
gcactaatcgaatcatctcgacgttaccctggtgagtttgataacggctttatctctttt
gctggacagagaatccgtggtgctattttagatgaattaagacgccaagattggcgtcca
agacctgtgaggcaacaagctcataaacttaatgataaggtacgagaacttactcgtgcg
tttggtcgtgaacctacagatagtgaagtggcgcaagggttagatttgtctcaagaagat
tatcgacaaagtttgtatgccactcaagctgaatcgatgaaaagtttagatgatatgtta
agcataggtgaacaacctgcagataaaaacaatgaagttgagcgttttttgctcaaaaaa
acattaattaaagcaatgacaaaattaaatgaaagagaacagctaattctgtcgctttac
tataatcatgaacttaatttaaaagaaatcgccctaacgcttggactcactgagacacgt
atttgccagttacataaacttgcagttgctagattagagagcttattacagtaa
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