Shewanella polaris: FH971_04600
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Entry
FH971_04600 CDS
T06579
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spol
Shewanella polaris
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spol03400
]
FH971_04600 (phrB)
Enzymes [BR:
spol01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FH971_04600 (phrB)
DNA repair and recombination proteins [BR:
spol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FH971_04600 (phrB)
Prokaryotic type
FH971_04600 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Haem_oxygenas_2
Motif
Other DBs
NCBI-ProteinID:
QDE30312
UniProt:
A0A4Y5YC54
LinkDB
All DBs
Position
1042950..1044383
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AA seq
477 aa
AA seq
DB search
MTSMNSLMWFRQDLRVADNPALVAACDFAIGNNSHLRAVYFVTPSQWAQHDVAPIQIDFM
QRHVNLLAQALAALGIQLDVVHVQDFAEVQEVLTTYIEKHQIGAVFAGNEPEINERRRDS
ALIDSGLPLTLIDQDCVLAPETVKNLAGGMYKVFTPFAKKWKSIANQRAIITKRVPAPMA
TALPSPDDIVFHCDKVSSDLWPAGEGVAKRILDQFLASQVADYHVDRDIPALEGTSRLSP
YLAIGVISSRQCVAAILARYPEALVDDACPAKTWLNELIWREFYRHLLVAFPRLSMGCNF
NELGDGIAWRNNADEFNAWCDGQTGYPLVDAAMRQLNQTGWMHNRLRMVVASFLTKHLLI
DWRWGERYFRQKLIDGDLAANNGGWQWSAGTGCDAQPYFRVFNPMTQSSKFDPDASFIKR
YVTEVSGWSLADIHLPKTVNVNDLFGQRLDEGYPQPIVEHKMARLRAIEVLSALKRG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgacttctatgaatagtttgatgtggtttaggcaagatttacgggtggcagataatccg
gccttagttgctgcgtgcgattttgccattggtaataatagccatcttcgagccgtatat
tttgtcacaccttctcagtgggcgcagcatgatgttgcgccgatacaaatcgattttatg
caacggcacgtaaatttattggcccaagcgctggccgccttaggtattcaacttgatgtt
gtgcatgtacaagattttgctgaggtacaagaggtattaaccacttatattgaaaagcat
caaattggcgctgtgtttgccggtaatgagcccgaaataaatgaacgtcgtcgtgatagt
gcattaatcgatagtggcttgccattaaccttaatagatcaagattgtgtattagcccca
gagacggtgaagaatttagcgggaggcatgtacaaagtcttcaccccttttgctaaaaaa
tggaagagtatcgccaatcagcgagcgattattaccaagcgcgtgcctgcgccaatggcc
acggctttaccatctccagatgacatcgtctttcattgtgacaaagtcagcagcgatcta
tggcctgcaggtgaaggtgttgctaaaagaatattagatcaatttctagcaagtcaagtg
gccgattatcatgtagatcgagacattccagccttagaaggaaccagtcgtttatcgcct
tatttggctattggtgtcattagttcacgccaatgtgttgccgctattcttgcccgttac
cccgaagctttagtcgacgatgcttgcccagctaagacctggttaaacgaattgatttgg
cgtgagttttatcgtcatttattggtggcatttccgcgtttatctatggggtgtaacttt
aatgagttgggcgatggtatcgcttggcgcaataatgccgatgaatttaacgcttggtgt
gatgggcaaacgggctatccacttgtggatgccgctatgcgtcaattaaatcaaacgggt
tggatgcataatcgattacgtatggtggtcgcgagttttttaaccaaacatttgttaatt
gattggcgctggggagaacgttactttagacaaaaactcattgatggcgacttagcggct
aataatggtggctggcaatggtctgcagggacaggttgcgatgcgcaaccttattttcga
gtgtttaatcctatgactcaaagcagcaaatttgaccccgatgctagctttataaaacgt
tatgtaactgaggtgtctggatggtctttggctgacattcacttacctaaaacggttaat
gtaaatgacttatttggccaacggctggatgagggatatccacagcctatcgttgaacat
aaaatggcgcgcttaagagccattgaagttttaagtgcacttaagcggggttaa
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