Shewanella polaris: FH971_04780
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Entry
FH971_04780 CDS
T06579
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
spol
Shewanella polaris
Pathway
spol00250
Alanine, aspartate and glutamate metabolism
spol00280
Valine, leucine and isoleucine degradation
spol00310
Lysine degradation
spol00410
beta-Alanine metabolism
spol00640
Propanoate metabolism
spol00650
Butanoate metabolism
spol01100
Metabolic pathways
spol01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
FH971_04780 (gabT)
00650 Butanoate metabolism
FH971_04780 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FH971_04780 (gabT)
00280 Valine, leucine and isoleucine degradation
FH971_04780 (gabT)
00310 Lysine degradation
FH971_04780 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FH971_04780 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spol01007
]
FH971_04780 (gabT)
Enzymes [BR:
spol01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
FH971_04780 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
FH971_04780 (gabT)
2.6.1.48 5-aminovalerate transaminase
FH971_04780 (gabT)
Amino acid related enzymes [BR:
spol01007
]
Aminotransferase (transaminase)
Class III
FH971_04780 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QDE30347
UniProt:
A0A4Y5YCJ3
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All DBs
Position
1084677..1085951
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AA seq
424 aa
AA seq
DB search
MTKTNDGLMARRQAAVAQGVGQIHPIFTERAENATVWDVEGREYIDFAGGIAVLNTGHLH
PKVKAAVAAQLDAFSHTCFMVLGYESYIEVCEKLNYLVPGDFAKKTALFTSGSEAVENAV
KVARAYTKRAGVIAFTAGYHGRTIAALALTGKVAPYSKGMGLMSANVFRAEFPCEMHGVS
EDDAMASIERIFKNDAEPADIAAIILEPVQGEGGFYAVTPSFMKRLRELCDNHGIVLIAD
EVQSGAGRTGTFFAMEQMGVSADITTFAKSIAGGFPLSGITGKAEIMDAVTAGGLGGTYG
GSPIACAAALAVIEVFEEEQLLARANDVGNRLKSALTNMQAKYSQIADVRGLGAMIAIEL
MEDGEPAPQYSGKILAEARNRGLILLSCGTYGNVIRVLVPLTAPDEQIDAGLAIMDATFQ
TVFK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaacaaatgatggattaatggcgcgtcgccaagcggcagtggctcaaggtgta
ggacaaattcaccctatttttactgaacgtgctgaaaatgccacagtatgggatgttgaa
ggccgtgaatatatagattttgcgggtggtattgcggttctcaatacgggtcatttgcac
cctaaagtcaaagcggctgttgctgcgcagttagatgcattttcacatacttgttttatg
gtattgggttatgaaagttacatcgaagtgtgcgaaaaacttaactatttggtaccgggt
gattttgctaaaaaaacggctttatttaccagtggctctgaagccgtagaaaacgcggta
aaagtggcccgtgcttacactaaacgtgcaggcgttattgcatttactgcaggctatcat
ggcagaacgattgctgcgctagcgttaacgggtaaagttgcgccttacagtaaaggcatg
ggcttaatgtctgccaatgtttttcgagctgaatttccctgtgaaatgcatggtgtatct
gaagatgacgccatggcgtcgattgaacgtatctttaaaaatgatgctgagcctgctgac
attgccgctattattttagaaccagtgcaaggtgagggtggtttttacgctgtgacacca
tcatttatgaagcgcttacgtgagttatgtgacaatcacggcatagtattaattgccgat
gaagtgcaaagcggtgcaggccgcacaggaaccttttttgccatggagcaaatgggggtt
tcggcagatattaccacttttgctaagtctattgctggtggttttccgctgtcaggtatt
acgggtaaagcggaaattatggatgcagtaaccgcaggaggcttaggcggcacttatggt
ggtagtcctattgcctgtgctgcggcattagcagtgattgaagtgtttgaagaagagcaa
ttattggctagagctaatgatgtaggtaatcggcttaagtcggcattaaccaatatgcag
gctaagtattcacaaattgctgatgttcgtggcttaggtgcgatgattgccattgaattg
atggaagatggtgaacctgctccacaatacagcggtaaaattttagccgaagctcgtaac
cgtggtctcattttattgtcttgtggcacatacggtaacgtcattcgcgtgttggtacct
ttaacggcaccagatgaacaaattgatgctggtcttgcgataatggatgctacatttcaa
acggtgtttaaatag
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