Shewanella polaris: FH971_05055
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Entry
FH971_05055 CDS
T06579
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
spol
Shewanella polaris
Pathway
spol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FH971_05055 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spol03019
]
FH971_05055 (rppH)
Messenger RNA biogenesis [BR:
spol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FH971_05055 (rppH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
QDE30395
UniProt:
A0A4Y5YCG8
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All DBs
Position
1150969..1151487
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AA seq
172 aa
AA seq
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MIDSDGFRANVGIIICNKFGQVMWARRFGQHSWQFPQGGLDDGESAEEAMYRELYEEVGL
RPEHVQILTSTRSWLRYRLPKRLVRQESKPVCIGQKQKWFLLQLKGHENSINLNSSGHPE
FDDWRWVSYWYPVRQVVSFKRDVYRKVMKEFASTTLALQTREFSKKRGKQRS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatagcgacggctttcgcgcaaatgtgggcatcattatctgtaataaatttggg
caggttatgtgggccagacgttttggtcaacattcatggcagtttccacaaggtgggtta
gatgatggcgaatctgcggaagaagctatgtatcgagaactctacgaagaagtggggctt
agacctgagcatgttcagattttaacgtccacacgttcttggttacgttatcgtttacct
aagcgtttggttcgccaagaaagcaaacctgtttgcattggccaaaaacagaaatggttt
ttactacaattaaaaggtcacgaaaatagcattaacctcaattcgtccggacatcccgag
tttgatgattggcgttgggtgagttattggtatcctgttcgtcaggtagtgtcttttaaa
cgcgatgtatatagaaaggtaatgaaagagttcgcatcgacgacattagcgctgcaaacg
cgcgaatttagtaagaaacgaggcaaacaacggagttaa
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