Shewanella polaris: FH971_05145
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Entry
FH971_05145 CDS
T06579
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
spol
Shewanella polaris
Pathway
spol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FH971_05145 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spol03400
]
FH971_05145 (recO)
DNA repair and recombination proteins [BR:
spol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FH971_05145 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FH971_05145 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
QDE30413
UniProt:
A0A4Y5YCZ1
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All DBs
Position
1168793..1169515
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AA seq
240 aa
AA seq
DB search
MATMQRGYVLHHRQFRESSVIVNLLIEGVGRVDAITRVGSGKRSIKSILQPFQPLIIQFS
AKSEAKNLGLKNITHIEAAAPAMPLGGYSLYSGFYLNELLVRLLSVEHQAEGLFLDYHRA
LLALAKQFCSSHLRYFEMALLLELGALPSLSYDTQGDLLDKHCQYRFITESGFLPVVTTQ
ESYFSHGKGCLSGAMLLALAAQDLQPDQFNQAKGLMRYLLNPLLGNKPLLSRQLFSKKAD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggccactatgcaacgtggctatgtgcttcatcatcgtcaatttcgtgaatcgagcgta
attgtcaatttgctgatagaaggcgttggacgggtcgatgcaattacccgagtgggctca
ggtaaacggtctataaaaagcatcttgcaaccatttcagcctctaattatccaattcagt
gctaaatcagaagcaaaaaatctgggtttaaaaaacattactcatattgaagccgctgcg
cctgctatgccgttaggtggttatagtctctattctggtttttaccttaatgagttattg
gttcgccttttatcagtggaacatcaagctgaagggttgtttttagactatcaccgagcg
ttactcgcactagctaagcagttttgctcaagtcaccttcgctattttgaaatggcactg
ttattagagttaggtgctttgccttctctttcctatgatacccaaggtgatttgcttgat
aagcattgtcagtatcgatttattaccgagagtggtttcctcccagttgtaaccactcaa
gaatcatatttttctcatgggaaaggctgtttatctggggcaatgttgctagcattagcc
gcgcaagatctacaacccgatcagttcaatcaagccaaagggttaatgcgttatttactg
aacccattactaggtaacaagccattattaagtaggcaattattcagtaagaaagcggat
tag
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