Shewanella polaris: FH971_07200
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Entry
FH971_07200 CDS
T06579
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
spol
Shewanella polaris
Pathway
spol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FH971_07200 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spol03400
]
FH971_07200 (recC)
Enzymes [BR:
spol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FH971_07200 (recC)
DNA repair and recombination proteins [BR:
spol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FH971_07200 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QDE30768
UniProt:
A0A4Y5YDT8
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All DBs
Position
complement(1630031..1633840)
Genome browser
AA seq
1269 aa
AA seq
DB search
MLTLIQSNQMEVLSEQLAKLLAIRLDNVSLLASEHVLVQSPGMSTWLRLEIAKHNGIAAA
LSFPLPSSFTWQLYHDLLPDVPKDNAFTKAAMTWKLMDLLPSLLDNPDFSPLKQYLSPQV
DTTADIANADMLDTDVDANTDTDIDTDTNVHTANSHAILQFNQSHDAIKLFQLCGRIADI
FDQYLVYRPEWILTWEQNQPLSSIDNRLALDENQQWQPILWRALIDYNQHHLHASHYHRA
NLHADLIATLANPDTDLSMLPARLYVFGISSMPPQTLDVLYHLASRIDVIMLSLSPCQHY
WGDIIEPKTRARMALQYANKKQLDQDWEDKLEVGNPILANNGQMGRELLDLLLSLPPEHT
DFGYDCYVEPEPNNLLHGVQYDILQMETLGEPLGPNASVYQNIHARRTLLPSDDSITLRS
CHSALREVETLHDHLLELLSNNSDLSPKDIVIMMPDVAAYAPYIDAVFGTANSQYFADKN
PQKGDYYIPYAIADRGAAQESPLINSFLSLLNINQSRFGLTDIIGILEVPAILRRFQLDD
DELSLIRRWLDDANVRWGRSEQTRSQLGVQPFTQNSWAFGIKRLILGYAFNDDADIYRDT
LMVQGIEGQSSQALGKLLNFLETIDTYFNLFANDYSTAERLEQLQQLLADCYDTTDDERE
QIQAIRDALVTLDTELESAGHQGQVDIEVLKQWFNQRLTESRVGQRYLAGSVNFCTLMPM
RSIPFKVVCLLGMNDGVYPRVQHPVGFDLMAHFGPKKGDRSRRLDDRYLFLEALLSAREQ
LYISYIGHSERDNAERIASMLVSELVEYCQLSYLPQSLQQQLEQQAEINLDDADKSVLAQ
LIQAQPLQPFDAKLFRETPLSAHSVNKLQHSFNAQWCPPPANATINNHFFEQALPLSAEQ
ADEVFAHTHINSEGIKVVELELSALIRFYRNPAQFFFNRSLKVDLSLDIQADDNDEPFSL
NALERYLLQSRMLDNAIEHQLDSPDLELLSKLKTSGELPMAPFDDLLINQYLRDISPLIN
RVQFLQDQQAMHTLNVDLNFDLPMQDFPAHALSVQGLPEQADTTHSSIVRVNLVGRIDDI
LPKGLVNYRPGTAHGRDFIRVYLRHLCINAMANSSTSGMGKNQFSYLLDIGHFHAFAPIT
AEQAQAQLMRFISGFIRGQTQPLCFMPKTAFAYVETDGDHEEKLLKAQQKWDDGQNQFGE
GHDPHNQRLFHFPEDFSEATFGALAIHLLQPMLSQYHKDKLAELDTFVSGTAVDIQAQLI
ANAAKLGAH
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgcttactttaattcaatctaatcagatggaagtgttatctgaacaactggccaaactg
ttggctattcgtttagataacgtcagtttattagccagtgagcatgtgttagttcaaagc
cccgggatgtcgacttggctgcgtttagaaatcgctaaacacaatggtatcgccgccgca
ttatcgttcccgttaccctctagttttacttggcagttataccacgacctgctgcccgat
gtaccaaaagataacgcctttactaaagcggcgatgacctggaagttaatggacttatta
ccaagtctgctagataacccagactttagcccgctcaaacagtacttatcgcctcaagtt
gataccactgctgatattgctaatgcagatatgcttgatacagatgtagacgcgaatact
gatactgatattgatactgatactaatgttcatacagcaaacagccacgccatattacag
ttcaatcaatcacatgatgcaattaagctatttcaattgtgtggtcgcattgccgatatt
tttgaccaatacctagtctatcgacctgagtggattttaacgtgggagcaaaaccagccg
ttatcaagcatcgacaaccgcctagcattagatgaaaaccaacaatggcaaccgatcctg
tggcgagcattaattgactataaccaacatcatttgcatgccagccattatcatcgcgcc
aatttacatgccgatttaattgcaaccttggccaatccagataccgatttatcgatgttg
cccgctcgcttatacgtgtttggtatttcgtccatgccgccacaaaccctcgatgtgctg
taccatttagccagtcgcattgatgtcattatgctgtctctcagtccttgccagcattat
tggggcgatattattgagccgaaaacccgcgcccgcatggcactgcaatatgccaataaa
aaacaactcgaccaagactgggaagacaagctagaagtaggtaatcctatattggctaat
aatggtcaaatgggccgcgaactgctggatttattactgtctctgccgccagaacacacc
gactttggttacgactgttatgttgagcccgagccgaataatctgctgcatggggtgcaa
tacgatatcttacaaatggaaacactcggtgagccattagggccaaacgccagtgtttat
caaaacattcatgctcgccgcaccttattacctagtgatgactcaattaccttacgcagt
tgccacagtgccctgcgcgaagttgaaaccttacatgatcaccttttagagctgttatca
aacaacagcgacttaagccctaaagacatcgtgatcatgatgcccgatgtcgcagcgtat
gcaccgtatattgatgcggtatttggcacagccaacagtcagtattttgccgacaaaaat
ccgcaaaaaggcgattactacataccttacgccattgcagacaggggcgcagcgcaagag
tcgccgctgattaatagctttttaagcctgttaaatatcaatcaaagtcgctttggactc
acagacattattggtattttagaagtgccggctattttgcgtcgcttccaactcgatgat
gacgaattatcattaatccgccgttggctagacgatgcgaatgtccgttggggccgcagt
gagcaaactcgtagccaactaggtgtgcagccttttacgcaaaactcatgggcatttggc
attaagcgtttaatcctaggctacgcttttaacgacgatgccgatatttatcgcgatact
ttaatggtacaaggcattgaaggtcagtcatcgcaggcattaggtaagttgctcaacttt
ttagaaaccatcgacacttattttaacttatttgccaatgactacagcaccgcagagcgt
cttgaacaattacaacaactactcgccgattgctacgacaccacagatgacgagcgtgag
caaatccaagccattcgagatgcattagtcaccctagacacagagcttgaaagcgccggt
catcaaggccaagtcgatattgaagttctaaagcagtggtttaatcaacgcttaactgaa
tctcgggtcggccaacgttaccttgctggtagcgtgaatttttgtaccttaatgccaatg
cgctcaatcccctttaaagtggtgtgcttgctgggaatgaatgacggcgtctatccgcga
gtacaacatcctgtcgggtttgatttaatggcacattttggccctaaaaaaggtgaccgc
tcgcgccgattagacgaccgctacctatttttagaagcgttactgtcggccagagagcaa
ctttacatcagttatattggccacagtgagcgcgataatgctgagcgcattgcctcaatg
ctagtgtctgaattggtcgaatattgccaactcagctacctaccgcaatccttacagcaa
cagcttgaacaacaagccgaaatcaaccttgatgatgccgataaatccgtactggcacag
cttattcaagcacaacctttgcagccgtttgacgctaaacttttccgggaaacgccacta
tctgcgcatagtgtgaataagctgcaacatagctttaatgcccaatggtgcccgccacca
gccaatgcgaccattaacaatcacttttttgagcaagcattacctttgtcggctgaacag
gcggatgaagtatttgcccatactcatattaatagcgaaggcattaaagttgtcgaactc
gaattgtcggcattaatccgtttttatcgtaatccagcgcaattctttttcaaccgcagt
ttaaaagtcgatttatcattggatattcaagccgatgacaatgacgaaccgtttagctta
aatgcactcgagcgttatttattgcaatcacgcatgctcgacaatgccattgaacatcaa
ctcgacagcccagatctcgaattactcagcaagctcaaaaccagcggtgaattgccaatg
gcgccgttcgacgacttgttaattaatcaatatttacgcgatatatcgccgttgattaat
cgggtgcagtttttacaagaccaacaagccatgcacacgttgaatgttgatcttaacttt
gatttaccgatgcaggattttccagcgcatgctctatctgtgcagggtttaccagaacaa
gcagatacaacccattcgtccatcgtgcgagtcaatcttgtcggccgtattgacgatatt
ttacctaaaggcttagtcaattaccgccccggcactgcccacggacgagattttattcga
gtatacttgcgtcatttatgcatcaacgccatggcaaattcgtccacctcgggcatgggt
aaaaatcaattcagttacttactcgatattggccattttcatgcctttgcacctattact
gctgaacaagcgcaggcacaattaatgcgctttatcagtggttttattcgggggcaaact
caacccttgtgctttatgcctaaaacggctttcgcctatgttgaaaccgatggcgaccat
gaagaaaagctacttaaagcccagcaaaaatgggatgacggccaaaaccagttcggcgaa
gggcacgacccacataaccagcgtttattccattttccagaagactttagcgaagcgaca
tttggggcattagccatccatttactgcaacccatgttaagccagtatcacaaagataaa
ttggcagaattagacacctttgtcagtggcaccgcggttgatattcaagcgcaactcatt
gccaacgcagctaaactaggagcgcattaa
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