Shewanella polaris: FH971_07600
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Entry
FH971_07600 CDS
T06579
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
spol
Shewanella polaris
Pathway
spol00230
Purine metabolism
spol00240
Pyrimidine metabolism
spol01100
Metabolic pathways
spol01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
FH971_07600 (nrdD)
00240 Pyrimidine metabolism
FH971_07600 (nrdD)
Enzymes [BR:
spol01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
FH971_07600 (nrdD)
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Gene cluster
GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Nup54
Proton_antipo_C
Zn_ribbon_TiaS
Zn_Tnp_IS91
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QDE30842
UniProt:
A0A4Y5YDK8
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Position
1737453..1739570
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AA seq
705 aa
AA seq
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MLVVVKRDGCRTAFDGCRIKEAVVAAMDSAGQADDQYALQLAQTVEQQMAAKTEVDILEL
QEAVENLLMSGPFKSVARHYIEYRHDRDKHREAQSKLNCAIRGLVEQSDNSILNENANKD
AKVIPTQRDLLAGIVAKHYAKTHLLPKDVVEAHEKGEIHYHDLDYAPFFPMFNCMLIDLA
GMLTHGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAEFVQISYQ
KHLVVAKKWQVADVEGYAMTQTEKECHDAFQSLEYEVNTLHTANGQTPFVTFGFGLGVSW
ECRLIQKSMLTVRMAGLGKNRKTAVFPKLVFAIKDGVNHKATDANYDIKKLALTCSTMRM
YPDILNYDQVVEVTGSFKTPMGCRSFLGTYEEDGQLVHEGRNNLGVVSLNLPRIALEAGK
DEKRFYQLLDERLLIARKALDTRIARLAGVKARVAPILYMEGACGVRLNADDDVSEIFKN
GRASISLGFIGLHETINALYGNEKHVFDNTELREKAVAIINHLKQATESWKQETGYGFSL
YSTPSENLCSRFCQLDTAQFGVVAGVTDKGYYTNSFHLDVEKSVNPYDKIDFEQPYPAIA
NGGFICYGEYPNMQNNIEALENVWDYSYSRVPYYGTNTPIDECYDCGFIGEFNCTSKGFV
CPKCGNHEPSRVSVIRRVCGYLGSPDARPFNFGKQEEVKRRVKHL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgctagttgtagtgaaaagagatggatgtcgtactgcatttgatggatgtcgtattaaa
gaagctgtggtggccgctatggactctgcgggtcaagccgatgaccaatatgcattgcag
ttagcacaaacggttgaacagcaaatggctgcgaaaactgaagtggatattctcgaacta
caagaagccgttgaaaatttactgatgtcggggccttttaaatcggtagcacgtcattac
atagaataccgtcatgacagagacaaacaccgtgaagcacaaagtaaattaaattgtgcg
attcgaggcttagttgagcaatcagacaactcaattttaaatgaaaatgccaataaagac
gccaaagttattccaactcaacgtgatcttctcgctggtattgttgctaagcattatgct
aaaactcatttgttacctaaagatgttgtcgaagcacatgaaaagggtgaaattcattat
cacgacttagattacgcaccgtttttcccaatgtttaactgcatgttaatcgatttggct
ggcatgttaacccatggctttaaaatgggtaatgctgaaattgagccgccaaaatctatt
tctaccgcaacggcggttacggcacaaattattgcccaggtggccagccatatttatggt
ggcacaacgattaaccgtattgatgaagtgttagctgagtttgtacaaatcagctatcaa
aaacatcttgtagtggcaaaaaaatggcaagtggctgacgtagaaggttatgcgatgacg
caaactgaaaaagaatgtcatgacgcattccagtcacttgaatatgaagtcaacaccttg
cataccgctaatggccaaacaccgtttgttactttcggttttgggttaggtgtgtcatgg
gagtgtcgcttaattcaaaaatcaatgctaactgtacgtatggctggcctaggtaaaaac
cgtaaaaccgcagtatttcctaaattggtctttgccattaaagacggtgttaatcataaa
gcaacagacgctaattatgatattaaaaaactggcgttaacttgttcaactatgcgcatg
taccctgatattttaaattatgaccaagtagtagaagtcactggttcatttaaaacccca
atgggttgtcgatcctttttaggtacttatgaagaggatggtcaattggtgcacgaaggt
cgtaataatttaggtgttgtaagcctcaatttaccgcgtattgctttagaagcgggtaag
gatgaaaagcgtttttatcaattactcgatgagcgtttgttaatcgctcgtaaagcatta
gatactcgcattgcacgtttagcgggagtcaaagcccgtgttgcacctattttgtatatg
gaaggtgcttgtggcgtgcgtttaaatgctgatgatgatgttagtgaaatcttcaaaaat
ggtcgagcatcaatttcattaggctttatcggcctgcatgagaccataaatgctttgtat
ggcaatgaaaagcatgtgtttgataacacagaattacgtgagaaagctgtcgctatcatt
aatcatttaaagcaagcgactgaatcttggaagcaagaaacgggctatggttttagttta
tacagtacgccaagtgaaaatttatgcagtcgtttttgtcagcttgataccgcgcaattt
ggtgtagtggcaggggtaacagacaaaggttattacaccaatagttttcatcttgatgtt
gaaaaaagtgtaaacccttatgacaaaattgattttgaacaaccatatccagctatagcc
aatggtggatttatttgctacggcgaataccctaacatgcaaaataatatagaagcgctt
gaaaacgtttgggattatagctacagccgagtgccatactatggcactaacacgcctatt
gatgagtgttatgattgtggttttattggtgagttcaattgtacaagtaaggggtttgtg
tgccctaaatgtggtaaccatgagcctagccgagtatccgttattcgtcgagtgtgtggt
tatctgggcagcccagatgcaagaccattcaactttggcaagcaagaagaagtcaaacgc
agagtgaagcatttataa
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