Shewanella polaris: FH971_08220
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Entry
FH971_08220 CDS
T06579
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spol
Shewanella polaris
Pathway
spol00061
Fatty acid biosynthesis
spol00071
Fatty acid degradation
spol01100
Metabolic pathways
spol01212
Fatty acid metabolism
spol02024
Quorum sensing
spol04146
Peroxisome
Module
spol_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FH971_08220
00071 Fatty acid degradation
FH971_08220
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FH971_08220
09145 Cellular community - prokaryotes
02024 Quorum sensing
FH971_08220
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spol01004
]
FH971_08220
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spol04147
]
FH971_08220
Enzymes [BR:
spol01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FH971_08220
Lipid biosynthesis proteins [BR:
spol01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FH971_08220
Exosome [BR:
spol04147
]
Exosomal proteins
Exosomal proteins of breast milk
FH971_08220
Exosomal proteins of breast cancer cells
FH971_08220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
QDE30953
UniProt:
A0A4Y5YEI2
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All DBs
Position
1875793..1877469
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AA seq
558 aa
AA seq
DB search
MMAIMTNDKPWLKQYPEDVPTKIDSSMYNNINDLFKESFSAHAKKAAYINMGHSLSYQDL
ESKSNAFAAYLQSELKMKKGERIALMMPNLLQYPITILGALKAGLIIVNVNPLYTPRELK
HQLRDSGSSAIVAVTNFGNNLQQILHETNIKHVILTKIGDELAIHKRTLVNFLIKHVKKI
VPKYHIPDAISLRRALTEGKKLPFIDPQITVDDLAYLQYTGGTTGPSKGAMLTHSNIISN
VLQVHAHFSPRTLYDKEYAVTPLPLYHIFANSVSMMFMLFLGATNLLITNPRDIDGFVAD
LSKYPFTMVFGLNTLFNGLNNHAGFQKLDFSHARFTIAGGMPTQKHIADRWQELTGMPVI
EGYGLTECSPVVAAGTHQQQSFISSIGVPLPSTELRIVNEKNEPLGPNQIGEIQIRGPQV
MKGYWQQEAETNIVMHPGGWLSSGDIGRMDDDGIFYIEDRKKDMILVSGFNVFPTEIEEV
ATLHPHIIEAAAIGIPDDATGEKVKLFIVRKGNVTVDEIKKHCRKYLTGYKNPRIIEFRD
ELPKSNVGKILRRELRDS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgatggctataatgacaaatgataaaccgtggttaaaacaatatcctgaggatgtgccc
acaaaaatagactcaagtatgtataataatatcaatgatttatttaaagagtcttttagt
gcgcatgctaaaaaagcagcatatattaatatgggacatagcttatcctaccaagatctc
gaaagtaaaagtaacgcttttgctgcttatctacaatctgaactaaaaatgaaaaaaggt
gagcgaatcgccttgatgatgcctaatttattgcaatatcccattactattttaggagca
ttaaaagcaggactcattattgtcaatgttaatccactttatacccctcgagagctaaaa
catcaattaagagattcggggtccagtgctattgttgccgtaacaaattttggtaataac
cttcagcaaatactgcatgagactaatattaagcatgttattttaaccaaaatcggcgat
gagttagcgattcataagcgtacattggttaactttcttatcaaacatgtcaaaaaaata
gtgcctaaatatcatattcccgacgctatttcattgcgtagagcgttaaccgaaggcaag
aaacttccctttattgatccccaaataacagtagatgatttagcatacctccaatataca
ggtggaacgacgggtccttcgaaaggggcaatgcttactcatagtaatattatttctaac
gttctacaggttcatgctcattttagcccaagaaccttatatgataaggaatatgcagta
accccacttccgctttatcatatttttgctaactcagtgagtatgatgtttatgctcttt
ctcggtgcaacgaatttactcattaccaacccaagagatatagacggtttcgtagcagat
ttaagtaaatatccattcacaatggtttttggtttaaatacactttttaatggtctaaac
aatcatgctggttttcaaaaattagattttagtcacgctcgttttactattgcaggtgga
atgccgacgcagaaacatattgctgatcgttggcaagagctcactggaatgccagtaata
gaaggttatggcttaactgaatgttccccagtggtcgctgcaggtactcatcaacaacaa
tcatttatttcttcaattggtgtccctttacccagcactgaactccgtatcgttaatgaa
aaaaatgaacctttaggtcccaaccaaattggtgaaatccaaattagagggccccaagtg
atgaaaggctattggcaacaagaagccgaaaccaatattgtaatgcatccaggaggttgg
ttaagctctggcgatattggaagaatggatgacgatgggattttttatattgaagaccgt
aaaaaagatatgattctagtttcgggatttaatgtttttccaactgaaattgaagaagtt
gcaacacttcaccctcacatcatcgaagctgcggccattggcattcctgatgacgctaca
ggagaaaaagttaaattatttattgtacgcaaaggtaatgtgaccgttgatgaaataaaa
aaacattgtagaaaatatcttaccggttataaaaacccaaggataatcgaatttagagat
gaattgccaaaatcaaatgtaggaaagatcttacgtcgagaattgcgagattcataa
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