Shewanella polaris: FH971_08955
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Entry
FH971_08955 CDS
T06579
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
spol
Shewanella polaris
Pathway
spol02020
Two-component system
spol02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FH971_08955
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FH971_08955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spol02035
]
FH971_08955
Bacterial motility proteins [BR:
spol02035
]
Flagellar system
Chemotaxis proteins
MCPs
FH971_08955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
sCache_2
dCache_2
HAMP
DUF948
LXG
Laminin_I
DUF2203
Goodbye
NleF_casp_inhib
TMF_TATA_bd
FPP
Motif
Other DBs
NCBI-ProteinID:
QDE31084
UniProt:
A0A4Y5YEH8
LinkDB
All DBs
Position
2036134..2037807
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AA seq
557 aa
AA seq
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MDFKSRGKLLLLTMLPLILITLLVTITFYLNGITDLENQAIDYKKELVARNQTFLKANLR
MGRTAIKALYDTDVNGNNKEQAKLILKNMRFADDGYFFAYDSKGVNTLHAVKPELEGKNL
YALKDENGVPVIAGLIDAATKGEGFLDFSWNKPSINAQAPKLGYAEYIDKWDWVLGTGIY
VDDVNDQVTIYIEKRQALLTEDLSFAIMIAILGLVITASTVIFVVNRSLIPLSSMLDKLN
EIAHGNGDLTGRLQTQGKDEIAELGDAFNQFMDTLQPIITEVKNSSVSVQQAAKSLDLQT
KNSVKTMHIHSQETEKVVSAITEMAATAREVANNTNTTSDAISSANSQINSAQQEVSQAI
DSIHQLVSEVNTTSDAIKSLSEQTDRITSVTDVIGSIAEQTNLLALNAAIEAARAGEQGR
GFAVVADEVRTLASRTQASTQEINQMLTNLQIGVKEAVITMSASQHRGEQTIHDSSVIQT
RLSDIQNVVGEIHDMGMQTATAAEEQSVVAEDITKNLTHIQDIVFELNDDLEKAATISSS
LAISGSQLNELVGHFKT
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggactttaaaagtcgtggaaagctacttctgttaacaatgctgccactgatccttatt
accttacttgtcacaatcactttttacttaaacggaattacagatcttgagaatcaagcc
attgattataaaaaagagttggtggcaagaaatcaaaccttcctcaaagccaatttgcgc
atgggacgaactgccataaaggctctttatgacaccgatgtgaacggtaataataaagag
caagccaagctaattcttaaaaatatgcgctttgccgatgatggttattttttcgcttat
gattcaaaaggggttaatactctccacgccgtaaagccagaactagaaggcaaaaattta
tatgctctaaaagatgaaaatggtgtgcctgtaatagcagggttaattgatgctgcaacc
aagggcgagggattcctcgatttctcatggaataaaccgtccattaatgcgcaagcacca
aaactaggctatgccgaatacatagataaatgggattgggtattgggtacgggtatctat
gtcgacgacgttaatgaccaagtcactatatatattgaaaagaggcaagccttactgact
gaagatttaagctttgcgattatgattgccattctgggactcgttattactgcaagtacc
gttatttttgtcgtcaatcgttctcttattccattaagttcgatgctcgataaactcaat
gaaatcgcacatggtaatggtgatttaaccggacgcctgcaaactcaaggtaaagatgaa
attgccgaacttggtgatgccttcaaccagtttatggataccttacaaccgattataaca
gaggtaaaaaatagttcggtttcagtacaacaagcggcaaagagtctcgatttacaaacc
aaaaactcagtaaaaacgatgcatatacacagccaagaaacagaaaaagtcgtctcggcc
attaccgagatggcagcgacagcacgagaagtggcaaataatacgaatacaacctcagat
gccatcagctctgctaatagtcagattaatagcgctcaacaagaagtatctcaagctatt
gatagtattcatcagcttgtttctgaggtgaataccacttcagatgcgattaaatcgtta
agcgaacaaactgatcgtataactagtgtgactgacgtcattggtagtattgcagagcaa
actaatcttttggcacttaatgctgcgattgaagccgccagagcgggcgagcaagggcgg
ggatttgcagtagttgccgatgaagtccgtacacttgcaagcagaacacaagccagtact
caagaaattaatcagatgctgactaacttacaaattggtgttaaagaagccgtgataacg
atgtctgcaagtcaacatcgtggtgagcaaacgatccatgactcttcagtaatacaaact
cgactatctgatatacaaaacgttgtaggtgaaattcatgatatggggatgcaaaccgca
acggcagcggaggagcaaagtgtagtggccgaagatatcaccaaaaatctgactcatatt
caagatattgtctttgaactgaatgatgatctagaaaaagccgcaaccattagttcttca
ttagccatctcaggcagtcaattgaatgaacttgtaggacactttaaaacctaa
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