KEGG   Shewanella polaris: FH971_09070
Entry
FH971_09070       CDS       T06579                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
spol  Shewanella polaris
Pathway
spol03030  DNA replication
spol03430  Mismatch repair
spol03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FH971_09070
   03430 Mismatch repair
    FH971_09070
   03440 Homologous recombination
    FH971_09070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spol03032]
    FH971_09070
   03400 DNA repair and recombination proteins [BR:spol03400]
    FH971_09070
Enzymes [BR:spol01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FH971_09070
DNA replication proteins [BR:spol03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FH971_09070
DNA repair and recombination proteins [BR:spol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FH971_09070
SSDB
Motif
Pfam: RNase_T Rv2179c-like CAF1 RNase_H_2 Jag_N
Other DBs
NCBI-ProteinID: QDE31105
UniProt: A0A4Y5YEI6
LinkDB
Position
complement(2064315..2065031)
AA seq 238 aa
MNNFSNQEILNWEAFLKLQAKNSKDRRLCDFYNVGTYQNDTPLSDIEFVALDFETTGLDS
QQNSIISIGLVPFNIQRIFCSKAKEWYLNPQDILQEDSIIIHGITHSDLKGAPNLLLILE
QLLDELAGKVVVVHFRHIERDFLDHTLRLLIDEGIIFPVVDTMQIEANVQREKSKGLFNF
FKRRRPASIRLANSRERYNLPAYSSHDALTDAIATAELFQAQIKYHFSPDTAIRKLWL
NT seq 717 nt   +upstreamnt  +downstreamnt
atgaataacttcagtaaccaggagattttaaactgggaagcctttctaaaattacaagca
aaaaatagtaaagaccgacgcttatgtgatttttataatgtcggaacctatcaaaatgat
acgccattaagcgatattgaatttgtggcattggattttgaaaccacaggcttagattca
caacaaaacagtattattagtattggattagtaccctttaatatacagcgtattttttgc
agtaaagcaaaagaatggtatctcaatccgcaggatatattacaagaagactcgattatt
atccacggtatcacccactctgatttaaaaggtgcacccaatctattgctgatattggaa
cagttgttagatgaactcgcgggaaaagtcgttgtagtgcattttcggcatatagaacgt
gactttcttgatcacactctacgcttgttgattgatgaaggaattatctttccggttgtt
gatacgatgcagatagaggctaatgtacaacgagagaaatcaaagggactgtttaacttc
tttaaaagaaggcgccctgcgtcgatccgtcttgctaatagtcgtgaacgctacaactta
cccgcttactcatcacacgatgccttaaccgatgcaattgctaccgcagaattgtttcaa
gcacaaattaagtatcatttcagtccagatactgcgattagaaaattgtggctataa

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