Shewanella polaris: FH971_09355
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Entry
FH971_09355 CDS
T06579
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
spol
Shewanella polaris
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
FH971_09355 (lapB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
Zn_ribbon_LapB
TPR_7
TPR_16
TPR_14
TPR_2
ARM_TT21_C
TPR_6
FAT
ANAPC3
TPR_8
TPR_21
NRDD
C1_2
TPR_17
Motif
Other DBs
NCBI-ProteinID:
QDE31159
UniProt:
A0A4Y5YF37
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Position
2141507..2142667
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AA seq
386 aa
AA seq
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MLEILFLLLPIAAGYGWYMGRRSIRHNDSQHSKKLSRDYFTGLNFLLSNESDKAVDLFIS
MLDVDDETIDTHLSLGSLFRKRGEVDRSIRIHQNLIARPSLTNEQRDIAMMELGKDYMAA
GFYDRAEEIFINLVSQDDHSEEAETQLLLIYQVTKEWQSAIDITKRLPRKRQQVLKCTTA
HFYCQLADEANDDADKIKKLQQAIKQDSQCGRAWLTLAKIYLDAGQFDLCKQALQQLKVA
DIDLFADGVSIAKQVYRDTQDPDGFHELLAKAIADGAGASVVVALAEHKISLNQHQSAET
MMLDNLYRHPTMKGFQHLMKLHIKQAEDGQAKQSLSMLEQLVEQQIKFRPSYRCTACGFP
SHGLYWHCPSCKQWGSIKRIKGLDGE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgctagaaatcttgttcttgttattgcctatcgctgccggttatggatggtacatggga
cgacgcagtattcgtcataacgatagccagcatagtaaaaagttaagccgagattatttt
actgggcttaattttttattgtcgaacgagtctgataaagcggtcgatctatttataagt
atgcttgatgttgatgatgaaactatcgacactcatttatcgttagggtcactctttcgc
aagcgtggtgaagtagaccgctcaatccgtattcatcaaaacttgattgctaggccgagt
ttgaccaatgagcagcgtgatatagccatgatggagttgggtaaagattatatggctgca
ggtttttacgaccgagccgaagagatttttattaatttagtcagtcaagatgaccacagt
gaagaagctgaaacacaacttctgttaatctaccaagtgactaaagaatggcaaagtgcc
atcgatattactaaacgattacctcggaaacgccagcaagtgctcaaatgcaccacggca
catttttattgccaactcgctgatgaagctaatgacgatgcagataaaattaaaaaacta
cagcaagccattaagcaagactctcaatgcggtcgagcttggttaaccttagctaaaatt
tatctcgatgccggccaatttgatttatgtaaacaagcgttacaacaactcaaagtggct
gacattgacttatttgctgacggtgtttcaattgcgaaacaagtctatagagacactcaa
gaccccgatggttttcacgagctgcttgctaaagcaattgcagatggtgcgggtgccagt
gtggttgtggctctcgccgaacacaaaataagccttaatcaacatcaaagtgccgaaacc
atgatgctggataacctctatcgtcatccgacaatgaagggttttcagcacttaatgaaa
ttacatattaaacaagctgaagatgggcaggcgaaacaaagtttatctatgcttgaacag
ctggtagaacaacaaattaaatttcgccctagttatcgctgtacagcctgcggttttccg
tctcatggtttatattggcattgtccatcatgtaaacaatggggcagtatcaagcgtatc
aaagggcttgatggtgaataa
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