Shewanella polaris: FH971_10965
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Entry
FH971_10965 CDS
T06579
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
spol
Shewanella polaris
Pathway
spol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FH971_10965 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spol03400
]
FH971_10965 (ruvB)
Enzymes [BR:
spol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FH971_10965 (ruvB)
DNA repair and recombination proteins [BR:
spol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FH971_10965 (ruvB)
RecFOR pathway proteins
FH971_10965 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
IstB_IS21
TIP49
AAA_14
AAA_3
AAA_22
nSTAND3
Mg_chelatase
DUF815
RNA_helicase
Rad17
AAA_17
NB-ARC
AAA_18
NTPase_1
AAA_24
AAA_19
TsaE
ABC_tran
AAA_33
AAA_11
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
QDE31437
UniProt:
A0A4Y5YFP2
LinkDB
All DBs
Position
complement(2513977..2514981)
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLIQPQEQGQDELIDRAMRPKMLDEYTGQDDTRAQLKIFIQAAINRREALDHMLI
FGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEEGDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGALTSPLRARFGIPLR
LEFYNVKDLTTIVTRSAKVMELEVDEQGAIEIAKRSRGTPRIANRLLRRVRDYAEVKHDG
KVTQKVAEYALDLLDVDEQGFDYLDRKLLLAIIDKFMGGPVGLDNLAAAIGEDRDTIEDV
LEPFLIQQGFIQRTPRGRIASQRAYEHFSLVKPE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagctgatcgtttaattcagccgcaggaacaaggtcaagatgaacttatagat
cgtgctatgcgtcctaaaatgttggatgaatataccggtcaagatgatactcgagctcag
cttaagatttttattcaagctgcgataaatcgtcgtgaagcccttgaccatatgttgatt
tttggccctccaggtttaggtaaaaccaccttagcgatgattgtagccaatgaaatgggc
gtcaatattaaatctacttctggacccgtgcttgaaaaggccggcgatttagctgccttg
ttgactaaccttgaagagggcgatgtactctttatcgatgaaattcatcgtttaagccct
gtagtagaagagatcctttatccggcgatggaagattaccaacttgatattatgattggt
gaaggtccagctgcacgttcgattaaattagatttaccgccatttacgcttattggtgcc
acaactcgtgctggggcgctaacgtcgccattgcgtgcgcgttttggtatcccattgcgg
ttagaattttacaatgtgaaagatctcactacaattgtgacacgttcagctaaggtgatg
gagcttgaggttgatgagcaaggggcgattgagatcgctaaacgctcacggggaacccct
cgtattgctaatcgtttattacgtcgggtacgtgactacgcggaagtaaaacatgatggt
aaagtgacccaaaaagtcgctgaatatgcgcttgatttgctcgatgttgatgaacaaggt
tttgattacttagatagaaaattgttattggctattatagataaatttatgggtggccca
gtaggattagacaacctcgctgcagctattggtgaagatagagatacgattgaggatgta
ttggaaccttttttaattcaacaagggtttatccaacgcacgccaagaggtcgtattgcc
tcccaaagggcatatgagcattttagtttggttaagcctgaatag
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