Shewanella polaris: FH971_11000
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Entry
FH971_11000 CDS
T06579
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
spol
Shewanella polaris
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spol03016
]
FH971_11000 (cmoB)
Transfer RNA biogenesis [BR:
spol03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
FH971_11000 (cmoB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_23
Methyltransf_31
CMAS
PCMT
Ubie_methyltran
PrmA
FtsJ
Motif
Other DBs
NCBI-ProteinID:
QDE31444
UniProt:
A0A4Y5YFI5
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Position
2522982..2523974
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AA seq
330 aa
AA seq
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MINFSSFYKDIADSNLQHWLETLPAILGKWQRDNNHGSLPKWEKVLNKLHYPQPDKVDFS
STVTIGTGEQLSPGQVEKLSNLLAVFQPWRKGPFIVHGIQIDTEWRSDWKWDRVKDYITP
LTNRTVLDVGCGSGYHMWRMLGAGATRVVGIDPSPLFLCQFEAIKRVAGNQHPIHLLPLG
IEELPALDAFDTVFSMGVLYHRRSPIDHLLQLRDQLRVGGELVLETLVIDGDENAVLVPQ
DRYGKMNNVWFIPSVAALMLWLKKCEFINVRCVDIDITSLAEQRSTAWMKNESLVDYLDP
NDVSLTIEGYPAPKRAIIIATKNQPNHDLV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatttcagttctttttataaagacattgccgattcaaatctgcagcattggctt
gaaacgctaccagccattttagggaaatggcaacgagataataatcacgggagtttacct
aaatgggaaaaagtcctcaataaattgcattatccgcaacctgataaagttgattttagt
agtactgtcaccattggaaccggtgaacaacttagccctggacaagtagaaaaactttct
aatttgcttgctgttttccaaccatggcgtaaaggaccatttatagttcatggcattcaa
attgatactgaatggcgaagtgattggaaatgggatcgagttaaagattacatcacaccg
ttaacaaatcgtaccgtattggatgtcggttgtggtagtggctatcatatgtggcgaatg
ctgggtgcaggagcgactcgagttgtcggaatagatccgtcgcctttattcttatgtcag
tttgaagccattaaacgagtcgctggaaatcaacatccaatacatttactgcctctaggg
attgaagagttacccgctttagatgcctttgatacggtattctcaatgggggtcctatac
caccgtcggtctcctattgatcatttactacaattacgagatcaactccgcgttggtgga
gaactggtattagaaacattggtgattgatggcgatgagaatgcagtacttgtgccacaa
gatagatatggcaaaatgaacaacgtttggtttataccctctgtagcagccttaatgtta
tggttaaagaaatgtgagtttattaatgttcgttgcgttgacatcgatatcacctcgtta
gcagaacaacgcagcactgcttggatgaaaaatgaatctctagtcgattacctcgaccca
aatgatgtaagtttaaccattgaaggttatcctgcacccaaaagagccattatcattgca
accaagaaccaaccgaatcacgacttagtgtaa
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