Shewanella polaris: FH971_11070
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Entry
FH971_11070 CDS
T06579
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
spol
Shewanella polaris
Pathway
spol00730
Thiamine metabolism
spol01100
Metabolic pathways
spol01240
Biosynthesis of cofactors
Module
spol_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
FH971_11070 (thiC)
Enzymes [BR:
spol01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
FH971_11070 (thiC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QDE31458
UniProt:
A0A4Y5YFR9
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All DBs
Position
complement(2537604..2539604)
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AA seq
666 aa
AA seq
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MSNQNRRQTRANAQQFIDTLKPLQHPNSEKVYLTGSRADINVAMRQVNQTDTVIGGTDAE
PIKQANPPIMVYDCAGAYSDPLADINVREGLPKIRQAWIDERQDTEQLTGASSGFTQQRL
ADDGLDHLRFDALVAPKRAKKGKCVTQMYYARQGIITPEMEYIAIRENMARAEVTDSVLT
QKAPGEDFGAHIGQLITPEFVRDEVARGRAIIPLNINHPETEPMIIGRNFLVKVNANIGN
SAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWLIRNSPVPIGTVPIYQALEK
VNGVAEELCWAVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKW
CLSHHQESFLYEHFRDICQICAQYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVKI
AWEYDVQAIIEGPGHVPMQLIKVNMEKQLALCDEAPFYTLGPQTTDIAPGYDHFTSGIGA
AMMAWYGVAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPGAQVRDNALSK
ARFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITHEVREYAA
NLEQAEALKIEVSSANAYQALHTTQAINPSEAMAQKSAEFKASGSALYHDVKPAAQVDTD
LAVEVE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcaaaaccgtcgtcaaactcgagctaacgctcaacaatttattgataccctt
aaaccgttacaacatcctaactcggaaaaagtctatttaacgggtagtcgtgctgatatc
aacgtcgctatgcgtcaagttaatcaaactgacaccgttattggtggtaccgacgctgaa
cccattaaacaagccaatccgcctattatggtctacgactgtgcgggtgcttattctgat
cctcttgctgatatcaacgtgcgtgaaggcttacctaaaatccgtcaagcatggattgat
gagcgacaagatactgagcaattaacgggtgcaagttcgggttttacccaacaacggctg
gctgacgatggactcgatcatttacgctttgacgctcttgttgcgcctaaacgtgccaag
aagggcaaatgcgtgacccaaatgtattatgctcgccaaggtattattacccctgaaatg
gaatacattgccattcgtgaaaacatggctcgcgctgaagtaaccgatagcgtgttgact
caaaaagccccaggtgaggattttggtgcacatattgggcaacttatcactcctgagttt
gtccgcgatgaagtggcccgaggtcgagcgattattccgctgaatattaaccatcctgaa
actgaacctatgattattgggcgtaattttttagtgaaggtgaatgccaatattggtaat
tctgcggtgacatcttcgattgaagaagaagttgaaaaactcgtatggtcaacccgttgg
ggcgccgatacggttatggatttgtcgactggacgttatattcatgaaacgcgtgagtgg
cttatccgtaattcgcctgtgccgattggtactgtgcctatttatcaagcattagaaaag
gttaatggcgttgccgaagagctctgttgggcggtatttagagatacattgattgaacaa
gccgagcagggcgtagactattttacgattcatgcaggggtgttattgcgttatgtcccc
atgacagctaaacgccttaccggtattgtgtcgcgtggcggttcaattatggctaagtgg
tgtttaagtcaccatcaagaaagtttcttatatgaacactttcgcgatatttgccaaatt
tgcgcccaatacgatgtgtcgttgtcgttaggggatggtatgcgccctggttcaattgcc
gatgccaatgatgaagcgcaatttgcggaattagaaaccttaggtgaattggtcaaaatt
gcatgggaatacgatgtgcaggccatcatagaaggccctggtcatgtgccaatgcaattg
attaaagtcaatatggaaaagcaattggccctttgtgatgaagcgccattttatacctta
ggcccacaaacgactgatattgcgcctggatatgatcacttcacctccggaattggtgca
gccatgatggcttggtacggcgtggcgatgttgtgttacgtcacccctaaagaacactta
ggtttgcctaacaaagaagatgtaaaacaaggcttaattgcttacaagattgctgcccat
gctgctgatgtcgctaaaggtcatcccggtgcacaagtacgtgataatgcattatcaaaa
gcccgctttgaattccgttgggaagatcaatataacctaggtcttgatccagataccgct
cgtgcttaccacgacgaatcgttaccacaagaatcagccaaagtggctcatttttgttca
atgtgtgggcctaaattctgttcaatgaaaataacccacgaagtgcgtgaatatgccgcg
aatcttgaacaagctgaagcacttaagattgaagtctcttcggctaatgcttatcaagct
ctacatacgactcaagccataaatccgtccgaagcgatggcgcaaaagtcggcagagttc
aaagcgtcgggctcggcactttatcatgacgtcaaaccagcagcacaagttgataccgac
ttagcggttgaggttgaataa
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