Shewanella polaris: FH971_12000
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Entry
FH971_12000 CDS
T06579
Name
(GenBank) DNA-binding response regulator
KO
K04333
LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
Organism
spol
Shewanella polaris
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spol03000
]
FH971_12000
Transcription factors [BR:
spol03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
FH971_12000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
VpsT-like_REC
Sigma70_r4_2
Sigma70_r4
HTH_10
HTH_40
HTH_38
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QDE31625
UniProt:
A0A4Y5YG82
LinkDB
All DBs
Position
complement(2752599..2753231)
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AA seq
210 aa
AA seq
DB search
MFKVVNWMIVSRSQLLTDLLDWRWPQEFLAKLSKSQPSSMAKMLAVEPISIVFFDLSTID
LQQVYQLQRLIEREYCSIHTVFINFPKQLDTRFLIHPTTTLGVFYADSSLNEISLGLNNI
MKGRRVIPQELLRSALNDENDEDSEPLTIREREVLQTLLSGSTNLDIANQLFVSESTIKT
HLYRAFRKIGVSSRGQAIAWAQTHMHEVRI
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagtcgtaaattggatgatagtatcaaggtctcagctgttaacagacttattg
gattggcgttggccgcaagagtttttagctaaattatctaaaagccagccaagctctatg
gccaaaatgttagctgtagaacctatttcaatagtattttttgacttatcaaccattgac
ttacaacaggtatatcaattacagcgtcttattgaacgtgaatattgttctatccatacc
gtctttatcaatttccctaaacaactcgatactcgatttcttattcaccccacaacgacg
ttaggggtattttatgctgacagcagcttaaacgaaattagtcttggcttaaataacatc
atgaaaggtcgtagagtcattcctcaagaattattacgttcagccctgaacgatgaaaat
gacgaggacagtgaaccgttaaccatccgcgagcgtgaagtattacagactttattatct
ggtagtactaatttagatattgctaatcagctatttgtcagcgaatcaactattaaaacc
catttataccgagcatttagaaaaattggggtgtctagtcgtggacaagcaattgcatgg
gcgcaaactcacatgcatgaggtgagaatataa
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