Shewanella polaris: FH971_12680
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Entry
FH971_12680 CDS
T06579
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
spol
Shewanella polaris
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spol03016
]
FH971_12680 (truA)
Enzymes [BR:
spol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FH971_12680 (truA)
Transfer RNA biogenesis [BR:
spol03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FH971_12680 (truA)
Prokaryotic type
FH971_12680 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QDE31742
UniProt:
A0A4Y5YG25
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All DBs
Position
complement(2905543..2906328)
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AA seq
261 aa
AA seq
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MRVALGVEYDGSSFYGWQRQLDVDSVQAQIEKALSFVANEPIKVLCAGRTDTGVHGTGQV
VHFDTNVQRPITAWTQGVNANLPDSVAVRWAKEVDDSFHARYSATARRYRYVIYNHKLRP
GILSAGVSHYHGVIDETLMHQAAQLLVGEHDFTTFRALHCQANTPIRNVHQVNVTRQGMY
VMVDIQANAFLHHMVRNIVGSLLQIGLGNQPIEWITQLLAVKNRKQAAATAKPNGLYLVD
VTYPEHFQLPKLSLGPLFMLD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcgcgttaggtgttgaatatgatggtagtagtttttatgggtggcagcgccaa
ctcgatgtcgattcagtgcaagcccagattgaaaaagccttaagttttgtggctaacgaa
cctataaaagtattatgtgccggacggactgatacgggggtgcatggtacagggcaggtg
gttcattttgacaccaatgttcagcgtccaataacggcttggacccaaggtgtaaatgct
aatttaccagacagcgtagcggtacggtgggcaaaagaagtcgatgatagttttcatgct
cgatatagtgctacagcaagacgctatcgctacgttatttataatcataaactgcgacca
ggcattttaagtgcaggtgttagtcattatcacggcgttattgatgaaaccttgatgcat
caagctgcacaacttttagtcggcgaacatgactttaccacttttagagctttgcattgc
caagctaatactcccattcgaaacgtgcatcaagtcaatgtgactcgccaaggcatgtat
gtgatggtagatatccaagctaatgcatttttacatcatatggtacgtaatattgtcggt
tcactgcttcaaattggtttaggcaatcaacctattgagtggataacacaactcttggca
gtaaaaaatcgcaaacaagcagcagccacagctaaaccgaatggcttgtatttggttgat
gtgacttacccagagcactttcaattacctaagttaagtctcggtcccttgtttatgctc
gattaa
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