Shewanella polaris: FH971_12705
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Entry
FH971_12705 CDS
T06579
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
spol
Shewanella polaris
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spol03016
]
FH971_12705 (mnmC)
Enzymes [BR:
spol01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
FH971_12705 (mnmC)
Transfer RNA biogenesis [BR:
spol03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
FH971_12705 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
FAD_binding_2
NAD_binding_8
Pyr_redox_3
Pyr_redox_2
DUF7690
F420_oxidored
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
QDE33255
UniProt:
A0A4Y5YL18
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Position
2915128..2917038
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AA seq
636 aa
AA seq
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MLGQLGFGDGHEIILLWAALRAINSHASLAKQQTRVHISIFEQTPINRKLLEQKWQQQGL
LHSDHPLIDLTQALLNCEIAAIKGCQRLSLHHNELVIDLYQGSPLEQTKTIATPKNNRIA
HWFALPYTSQVTHSDHYFNQYLLWQYGRISLDNATFFTATLDNNGIPSAIKKQLDFCGFS
QTIPATSTDNIAIAEREALRQQTRQQFAYNPIPAIQCNDDGPIAIIGGGIASASLALSLA
ERGKSVIIYCKDEQLGQGASGNKQGAIYPLLTPENNSLSQFFQQAFLYSRRRIQALVDDG
YHIGHDWCGVLHTGFDQRSQTRLDKIIHGQTWPSEIAFSVNPKQATRLANVDIDKSGFYY
PLGGWACPFEFAQASIAKAQTLTKVRVIYNSDISSLKSHSSGWQLFSGENNNSIATHSQV
VIASGSQLTRYHQTKKLQITAFRGQVSHVPSQGELAQLNTVICANGYLTPQRDQLHCVGA
SYVKDPKHLEFCLQEQHENSLKMQQSFPNANWPNDIDVSNNDARVGERMVSRDHFPVMGC
VPDVKEIFARYAVQQKSKDKPSLWQRYWQTTAAPIYEGLYVLGGLGSRGLSSGPLIAECL
AANLCGELSPLSLDLQAQLNPNRMWLRKLLKGKSLM
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgctaggccaattaggtttcggcgatggccatgaaatcatcctattatgggcagcctta
agagctataaatagccatgcttctctagctaaacaacaaacccgagttcacatcagtata
tttgaacaaacgcctataaaccgaaagctacttgaacaaaaatggcaacagcaaggactc
cttcattcagatcaccctttaattgatttgacccaagcattactcaattgcgaaatagcg
gctatcaaaggttgccaacgattaagtctacaccacaacgaattagtcattgacctatat
caaggctcgcctttagagcaaactaaaacgattgccacaccgaagaataacagaatagca
cattggtttgccctaccttatacgagccaagtgactcattcggatcattattttaatcag
tatttattgtggcaatatgggcgtatcagtcttgataatgcgacattttttaccgctacc
cttgataataacggtattccctctgcaatcaaaaagcaattggatttttgtgggttttca
caaacaattccggccacatcaacggataatattgctattgcagaacgtgaagctctcaga
caacaaacacgccaacagtttgcctacaatccaattcctgcaatccagtgtaatgacgat
ggtcccattgccattataggcgggggaatagcttcagcaagtctggctttatcattagct
gagcggggaaagtcggtaatcatttattgtaaagatgaacaattaggacaaggtgcatca
ggtaacaaacaaggtgcaatttaccctttactcacgcctgaaaacaattcactcagtcag
ttttttcaacaagcttttctctatagccggcgtcgcattcaagcattagttgatgatggt
tatcatattggacatgattggtgtggtgtattacacacgggctttgatcaacgtagccaa
acaagattagataaaattattcatgggcaaacgtggccaagtgagattgcttttagtgtc
aatccaaaacaagctacacgacttgctaacgtcgatatcgataaatcaggtttttattac
cccttgggtggttgggcttgcccgtttgaattcgcacaggcgagtattgccaaagcacaa
acattaaccaaagtgagggtaatttataatagcgacattagctcacttaaatcacattca
tctggctggcaactgtttagtggcgaaaataacaactccatagcaacacatagtcaggtt
gttattgcctcaggatcgcaacttactcgctaccaccaaacaaaaaaactgcaaattaca
gcttttagggggcaagtcagtcatgttccctcacaaggtgaactcgcacagcttaatacg
gttatctgtgccaatggttatctgacaccacaacgagatcagttacattgtgtcggtgca
agttacgtaaaagatcctaagcatctagaattttgcttacaagaacagcatgaaaatagc
ctaaagatgcagcaaagctttcctaacgctaactggcctaacgatattgatgtttcaaat
aatgatgccagagttggcgaaagaatggtgagtcgagatcatttccccgttatgggatgt
gtacctgatgttaaagagatatttgcgcgttatgccgtacagcaaaaatctaaagataaa
cccagcctatggcaacgatactggcaaactacagcagcaccgatttatgaagggttgtat
gtattaggtggattaggctcgcgaggattaagttcaggtccactcattgccgaatgccta
gcggcaaatctatgcggtgaattgtcgccattaagtttagatttacaagcacagcttaac
ccaaacagaatgtggctgcgtaaactgcttaaaggcaaatcgttgatgtga
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