Shewanella polaris: FH971_13245
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Entry
FH971_13245 CDS
T06579
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
spol
Shewanella polaris
Pathway
spol03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FH971_13245 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spol03032
]
FH971_13245 (rnhB)
Enzymes [BR:
spol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
FH971_13245 (rnhB)
DNA replication proteins [BR:
spol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
FH971_13245 (rnhB)
Elongation factors (archaeal)
FH971_13245 (rnhB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
QDE31839
UniProt:
A0A4Y5YH58
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All DBs
Position
complement(3046902..3047549)
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AA seq
215 aa
AA seq
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MTSINALPVVIKNITPEQVAIISHGQVAGVDEVGRGPLVGDVVTAAVILDPSKPIVGLND
SKKLSEKRRNALYQQIMDNALSVSVGRASPAEIDELNILHATMLAMQRAVAGLSILPERV
LVDGNRVPEFGIASHAIIKGDGLVAAISAASIIAKVTRDAEMDTLDSQYPQYGFAKHKGY
PTKAHFEALALYGVLPEHRKSFKPVAERILLQDTL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgacttctattaacgcattacccgtcgtgataaaaaatattactcctgaacaagttgcc
attatttcacatgggcaagttgctggtgttgatgaagttggacgtggtccattagttggc
gatgtggtgactgctgcggtgatattagacccgagtaaaccgatagtaggccttaacgat
tctaaaaaactcagtgaaaaacgtcgtaatgctttgtatcaacagattatggataatgcg
ttaagtgtgagtgttggccgagcgagtccggctgaaattgatgagctgaatattttgcat
gccactatgttggcaatgcagcgcgcagtggctggattatctattttacctgaacgagta
ttggtagatggtaatcgggtgccagagtttggtattgctagccatgcaattataaaaggc
gatggattagttgccgccatcagcgccgcatcaattattgctaaagtgactcgagatgca
gagatggatacgttagacagtcaatatccacaatatggctttgctaaacacaaaggttat
ccaaccaaggcacattttgaagcattagccttgtatggtgtgttacctgagcatcgtaaa
agttttaaacctgttgcagaacgtattttgcttcaggataccttgtaa
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