Shewanella polaris: FH971_13785
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Entry
FH971_13785 CDS
T06579
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
spol
Shewanella polaris
Pathway
spol02020
Two-component system
spol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FH971_13785
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FH971_13785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
spol02022
]
FH971_13785
02035 Bacterial motility proteins [BR:
spol02035
]
FH971_13785
Two-component system [BR:
spol02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
FH971_13785
Bacterial motility proteins [BR:
spol02035
]
Flagellar system
Flagellar assembly proteins
Others
FH971_13785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_30
AAA
AAA_19
AAA_16
AAA_14
MerR
AAA_3
HTH_24
AAA_22
HTH_50
NPHP3_N
HTH_11
AAA_7
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QDE31934
UniProt:
A0A4Y5YGU9
LinkDB
All DBs
Position
complement(3175587..3176936)
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AA seq
449 aa
AA seq
DB search
MAEASILLVEDDADLREALLDTLMLAHYDCVDVGSAEEAILALKANHFDIVISDVQMEGI
GGLGLLGYLQQHQPKLPVLLMTAYATIDNAVSAMKLGAVDYLAKPFAPEVLLNQVSRYLP
LKQNHDKPVVADEKSLALLSLAQRVAVSDASVMIMGPSGSGKEVLARFIHQHSQRHDQPF
IAINCAAIPENMLEATLFGYEKGAFTGAYQACPGKFEQAQGGTILLDEISEMELGLQAKL
LRVLQEREVERLGGRKTIKLDVRVLATSNRDLKAMATSGEFREDLYYRINVFPLTWPALH
QRPADILPLARHLLIKHAKAFNMISVPKLDDAATRRLLTHRWPGNVRELDNVIQRALILR
ANDDIGVNDIIIDSADVKLVSTESIDTDKPVDVDGLGDELKAQEHVIILETLNQCQGSRK
MVAEKLGISARTLRYKMAKMRDMGIQLPA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaagcaagtattctattagttgaggatgacgctgatttacgtgaagcattgctt
gatactctcatgcttgcccattacgactgtgttgatgtcggtagtgccgaagaggctatt
ttggccttgaaagcaaaccattttgatatagtgattagcgatgtgcagatggaaggcatt
ggtggattgggtttactgggttatttacagcaacatcaacctaaactgccggtattgtta
atgaccgcttatgcgacgattgacaacgctgttagtgcaatgaaattaggtgcagtagat
taccttgctaaaccgtttgcgcctgaagtgttgttgaatcaggtgtcacgttatttaccg
ttaaagcaaaaccacgataaacctgtggttgccgatgagaaaagtttagccttgttgtcg
ctggctcagcgggtagcagtgtcagatgcatcggtcatgattatggggcctagtggttcg
ggtaaagaagtgttggcgcggtttattcaccaacatagtcaacgccatgatcagccgttt
attgcgattaactgcgctgcaataccagaaaacatgttagaagccactttgtttggttat
gaaaaaggcgcatttactggtgcttatcaagcttgccctggtaaatttgaacaagctcaa
ggcggcaccattttacttgatgaaatatccgagatggaacttggcttacaagctaaatta
ctcagggtattacaagaacgcgaagttgagcgtttaggtggtcgcaaaaccattaaacta
gatgtgcgagtactggcaacctcaaatcgagatttaaaagccatggcgacctcgggtgag
tttagagaagatttatactaccgaattaatgtttttccgttaacctggcctgcgctacat
caacgccctgcagatattctacctttggcgcgacacttgctgattaagcatgcaaaagca
tttaatatgatttctgtacctaagcttgatgatgctgctactaggcgtttattaacccat
cgttggccgggtaatgtgcgtgagttagataatgttattcaacgtgcactgatattacga
gctaatgatgatattggcgtcaatgatattattattgactctgccgatgtgaagttggtt
tctacagagagtattgatactgataagcctgttgacgtagacggtttaggcgatgaatta
aaagcccaagaacatgtgattattttagaaacccttaatcaatgtcaggggagtcggaaa
atggtcgcagaaaaactggggatcagtgcccgcacgttacgttataaaatggctaaaatg
cgtgatatggggatccaattacctgcatag
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