Shewanella polaris: FH971_14800
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Entry
FH971_14800 CDS
T06579
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
spol
Shewanella polaris
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spol03016
]
FH971_14800 (truD)
Enzymes [BR:
spol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FH971_14800 (truD)
Transfer RNA biogenesis [BR:
spol03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FH971_14800 (truD)
Prokaryotic type
FH971_14800 (truD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QDE32114
UniProt:
A0A4Y5YHD0
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All DBs
Position
complement(3411058..3412131)
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AA seq
357 aa
AA seq
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MKELHYLFGKPISQADLRTHNSDFIVKEILPFTPTGEGEHHMLHVRKNGMNTVYVAEILA
KFAKVHPKEVTFAGQKDKNAITEQWFGVRIPGKETPEWTQLNDDKLTILSSGRHSKKLRI
GALLGNRFVLTLRNITEVADIEARLQQIAKMGVPNYFGEQRFGHDGKNLLLGRQMLSGGR
NVKDRNKRSMYLSAVRSNIFNQVVSYRLVTHQAQTLAGDCVMLAGSKSYFTVQAWDDVLN
ARLAEKDIQLSAPLWGRGTPLAQDEALTVEMTPLVDLSIDLQGLEEAGLSQERRPLLLEP
QGIKWQFDADTLTLEFVLPAGSYATSVLRELADYQDVQELQRKVMVADQQAQTKQES
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattacattacctatttggtaaaccaataagccaagccgatttgcgcactcat
aacagtgattttattgttaaagaaattttgccttttacgccgacgggcgaaggcgaacat
catatgctgcacgtgcgcaaaaatggcatgaataccgtttatgttgctgaaatattggct
aagtttgctaaagttcatccaaaagaagtgacctttgctggccagaaagacaaaaacgcc
atcactgaacaatggtttggggtgcgtattcctggtaaagaaacaccagagtggacgcag
cttaatgatgataaattaacgattttgtcgagcggtcgccacagtaaaaaattgcgtata
ggcgctttgcttggcaatcggtttgtgctgacattacgtaatattaccgaagtcgctgat
attgaagcgcgtttacaacaaattgccaaaatgggtgttcctaattactttggtgagcaa
cgttttggtcatgacggtaaaaacttgctgttagggcgacaaatgcttagcggcggtcgt
aatgtaaaagatcgcaataaacgcagtatgtatttatcagctgtgcgttctaacatattt
aatcaagtggtttcctatcgcttagtgactcatcaagcccaaacattagcgggtgattgt
gtcatgttagccggcagtaaaagctattttactgttcaagcatgggatgatgttctcaat
gcgcgtttagcagaaaaagatatccaactatcagcgccattgtggggcaggggaacaccc
ttagctcaagatgaagcattaactgtagaaatgacgccattagttgatttgtcaattgac
ttacagggacttgaagaggcgggcttgtcacaagagcgacgcccattattacttgagcct
caaggcattaagtggcagtttgacgctgatacgctcacgcttgaatttgttttgcctgcg
ggaagttatgcaacgtcagtacttcgcgaactggctgattatcaagatgttcaagagtta
caacgaaaagtcatggttgcagatcaacaagcacaaacaaaacaagagtcttaa
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