Shewanella polaris: FH971_15585
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Entry
FH971_15585 CDS
T06579
Name
(GenBank) cobalamin-binding protein
KO
K06858
vitamin B12 transport system substrate-binding protein
Organism
spol
Shewanella polaris
Pathway
spol02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FH971_15585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spol02000
]
FH971_15585
Transporters [BR:
spol02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Vitamin B12 transporter
FH971_15585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_2
DUF7719
OprB
Nup54_57_C
Motif
Other DBs
NCBI-ProteinID:
QDE33296
UniProt:
A0A4Y5YL92
LinkDB
All DBs
Position
complement(3596158..3596946)
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AA seq
262 aa
AA seq
DB search
MASDDLQGKPPAKRIIALSPHGVEMLFAIGAGSSIIATTDYADYPAAAKNIPSIGGYYGI
QIERVIELNPDLIVVWQSGNKMEDINQLRDLGFNLFNSDPKRLVDVATDLEQLGKLTGHS
VKAKQVADDYRQQLAEIKQQNQAKPVVKVFYQLWSTPLMTVAKGSWIQNLIEVCHGENVF
YNAASEYPQISIENVLLTSAEVILQSQDEGNILGINWAEWPELPAVKNQHIYQFDADLLH
RATPRAIQGVNAVCGALDKVRG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagatgatttacaaggtaagccgccagcgaaacggattattgctttatcgcct
catggggttgaaatgctgtttgcgattggtgcaggcagctcaattattgccaccaccgat
tatgccgattacccagcagctgctaagaatattccgagtatcggcggctattatggtatc
caaatagagcgagtgattgagctaaatcctgatttaattgtggtgtggcaaagcggcaat
aaaatggaagatattaatcaattacgtgatttaggttttaacctgtttaatagcgaccct
aagcgcttagttgatgtcgccacggatcttgaacaattaggcaagctcacaggacattca
gttaaggccaagcaagttgcagatgattatcgtcagcaattagctgagattaaacagcaa
aaccaagctaagcccgtggtaaaagttttttatcaattatggtcaacgccactgatgaca
gttgctaaaggcagttggatccaaaaccttattgaagtgtgccatggtgaaaatgtgttt
tataacgcagcaagtgagtacccacaaattagcatcgaaaatgtgttactaaccagcgca
gaagtgattttacaaagccaagatgaaggtaatattttagggatcaactgggctgaatgg
cctgagttacccgcggtaaaaaaccagcatatatatcagtttgatgccgatttacttcat
cgggcaaccccaagggcaattcaaggcgttaatgcggtttgcggggcgttggataaagta
agagggtag
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