Shewanella polaris: FH971_15610
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Entry
FH971_15610 CDS
T06579
Name
(GenBank) RluA family pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
spol
Shewanella polaris
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spol03009
]
FH971_15610
03016 Transfer RNA biogenesis [BR:
spol03016
]
FH971_15610
Enzymes [BR:
spol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
FH971_15610
5.4.99.29 23S rRNA pseudouridine746 synthase
FH971_15610
Ribosome biogenesis [BR:
spol03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FH971_15610
Transfer RNA biogenesis [BR:
spol03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
FH971_15610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QDE32263
UniProt:
A0A4Y5YIG2
LinkDB
All DBs
Position
3601046..3602785
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AA seq
579 aa
AA seq
DB search
MSVFLMSVNDPCFIPFSDVIAFNNTLAEQGLPSSFTFPFYYQPHSLTILAAQQLQQELLE
ANSWGHNFGLDSKNDRGMVIGKMFGVLVVKDTLGQLGFLASFSGKLADQNILPPFVPPVF
DMLTQDSFFNSDNKQINQINLSISQQEANPLLATLTTTLAAQQHQAESELEQQRSAIVEG
RKQRKLQREQVDAALAQKNINEDSHKTLSIDLSRQSVQQKHQLNALKLLWQTQIEVTKVA
LDSLQQQIKKLKQQRKQLSNGLQKKLFAQYQFLNTLGEARDLNDIFNDAPNHLPPAGAGE
CAAPKLLQYAFTHQFTPIAMAEFWWGSSPKSEIKQHKNYYPACHGKCRPILTHMLKGMQV
DDDPLLINPGKDQHIDIIYQDDVMVIINKPAELLSVPGKNITDSVFSRMQQQYPNATGPL
IVHRLDMSTSGLMVIALTKEANKALQQQFIQRSVTKRYIALIEGVPNQDTGDISLPLRVD
LDDRPKQLVCYEHGKHAETFWQVHQRQGKRTLIHLYPKTGRTHQLRMHCAHHDGLHMPIV
GDDLYGVATNRLHLHAQYLSLNHPVTNEEMVFEVKADFE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgtgtttttgatgtctgttaacgacccgtgttttattccttttagtgatgtaatt
gctttcaataacacgcttgccgaacaagggttgcctagctcttttactttcccgttttat
tatcaacctcattcattaacaatattggctgcgcagcagttgcagcaggaactacttgag
gctaactcttgggggcataattttggcttagacagcaaaaatgatcgtggcatggtgatt
ggtaagatgtttggtgtgttggtggttaaagacacactcggacaacttggttttttagcg
tcattttcaggtaagttagccgatcaaaatatcttgccaccgtttgtgccaccggtgttt
gatatgttgacccaagacagcttttttaatagtgataataaacagattaaccaaattaat
ctgtcgattagtcagcaagaagcgaatccgttactggcgacattaaccacgactttagct
gcgcaacaacatcaagctgaaagtgaacttgagcagcaacgcagcgcaattgttgaaggt
cgaaaacagcgtaagcttcaacgtgagcaagtagatgctgccttagcgcaaaaaaacatc
aacgaagatagccataaaaccttgtctatcgacttaagccgtcaaagcgtacagcaaaaa
catcagttaaatgcattaaagctgctgtggcagactcaaattgaagtcactaaggtggcc
ttagattcacttcagcagcaaattaaaaagttaaaacaacaacgtaaacaactttcaaat
ggattacaaaaaaagctctttgcccaatatcagtttttaaataccttgggtgaagcgcgt
gatttaaacgatattttcaatgacgcgccgaatcatttaccgcctgctggtgccggagaa
tgtgcagcacctaagttactgcaatacgcgtttactcatcaatttactccaattgcgatg
gcagagttttggtgggggtcatcgccgaaatctgagataaagcagcacaaaaactactac
ccagcttgccatgggaaatgccgacctattttgacccacatgcttaaaggtatgcaggtt
gatgacgaccccttgctgattaatccaggtaaagatcaacacattgatattatttatcaa
gatgatgtgatggtgattattaacaagcccgcagagttattatcggtaccaggtaaaaat
atcaccgactcggtgtttagccgtatgcagcaacaataccctaatgcgacggggccgctg
attgttcatcgcctagacatgtcgacatcaggtttaatggtaatagcgctcaccaaagaa
gccaacaaagccctgcaacaacagtttattcaacgcagtgtcactaagcgttatatcgcg
ttaattgaaggtgtacctaatcaggacacaggtgatattagtttgccattgcgggtagat
ttagacgatcgtcctaagcagttagtatgttacgagcatggcaaacatgccgagacattt
tggcaagtgcaccagcggcaaggaaagcgcaccttaatacacttataccctaaaactggg
cgtactcatcaattacggatgcattgtgctcatcatgatggtttgcatatgccaatagtt
ggggatgatttatacggtgttgcgactaaccgtttgcatttacatgcgcagtatttaagc
ttaaatcatccggtgacaaatgaagaaatggtatttgaagtaaaagcagattttgaataa
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