Shewanella polaris: FH971_16025
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Entry
FH971_16025 CDS
T06579
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
spol
Shewanella polaris
Pathway
spol00630
Glyoxylate and dicarboxylate metabolism
spol00680
Methane metabolism
spol01100
Metabolic pathways
spol01120
Microbial metabolism in diverse environments
spol01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FH971_16025
09102 Energy metabolism
00680 Methane metabolism
FH971_16025
Enzymes [BR:
spol01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
FH971_16025
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
Fer2_4
NAD_binding_8
Fer4_7
Fer4
DAO
Fer4_6
Thi4
Amino_oxidase
NAD_binding_7
Fer4_21
HI0933_like
Fer4_2
FAD_oxidored
Fer4_8
FAD_binding_2
FAD_binding_3
Fer4_10
Fer4_9
Fer4_17
Lys_Orn_oxgnase
Fer4_18
Fer4_16
Fer4_15
ApbA
AlaDh_PNT_C
Fer4_4
FMO-like
2-Hacid_dh_C
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
QDE32335
UniProt:
A0A4Y5YIA3
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All DBs
Position
3702056..3706273
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AA seq
1405 aa
AA seq
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MFDITIDGKTLSLPQADSLLKAATDAGINIPNLCDFSHSKAKQQCNLCQVQIKNHDGSLR
CVRACETALETGLEVITQSSYLSKIRQEALENILSDHFADCEAPCQTACPAGVDVQSYLY
HIGKGDYKEAVKVIKKTLPLPLSIGRVCPAFCEAECRRGLVDEPVAIRQLKRHAADLDLA
DLESYVPPKAPATNKRIAIIGSGPAGLTTGYYLSNNGHDVTIMESAPKAGGWLRYGIPEY
RLPKDILDKEIELLTRNGLKIKTGCALGRDTNLTELVANYDAVCLAIGAQKAVPMNYPGS
DLQGCYLGVDYLRDYCTDKKFITGKKVAVIGGGNTAIDCARTAVRDGADVTLIYRRSRDE
MPAEPYEIHEAEEEGVKFHFLTNPIENHSDSQGRVKSVTFAKMALGEPDTSGRRSPKATG
VTFEEAFDTVIPAVSQQVDLDFLDQPENQIDTGHLALTRWHTFLGCEQTMSAGIEKLFVI
GDSRTGPGTAVGAVADGRKAAEAIEGLLTDGLTCHLEQGLFNSRKANKTASLSAELYPDL
YPEIAKRPRLKMPELSQLNRTLNFAEVELGFVPDEAMKEAMRCLECACQANTDCKLRDYA
TEYKVDGKTLDQTQARKFKVDNSAPFITFDANRCISCGACVEACHQQSGHNVICFEPNSY
QALPDATTAGIIRNAPRVGFTASMNDSDCVQCGNCVQACPTGALVDARDKTQGTDRELTK
TSTVCTYCGVGCRVELHVDQQTNHVMRVTGDTHSLVNEGMLCVKGRSGFDFLNSPKRLTT
PLIRKNGQLQPASWNEAISYISEQLQPIKDAAGPSKFAALSSAKCTNEENYLMQKFTRSI
MGTNSIDHCARLCHSSTVAGLSDTIGGGAMTNDIPSIKDSDVIFIIGSDTTSAHPIIASH
IKRAVSQHGARLIVADPKKTTIADSANLYVSHRPGTDVMLLNAIMQQIIINDWQDADYIN
NRVEDYALLKQEVMKPDYNLANAELITGVSAEDIATMAKMIGTATKTALYYAMGITQHTS
GYDNVVSTSNLQLLCGNIGVNGAGLNPLRGQSNVQGACDMGALPNYYPGYQKINPSNNAK
FAKAWGNTSLNSEIGLAATEIMHAIVKGKLDALYILGENPVLSDPDQAHVVAALSKIKFM
VVQDIFLTETAQMAHVVLPATSFAEKDGHFTNTERRVQQLRVALTPPGEAIVDWKIIQMI
ANTLGANWNYHSTKDIWDEINHVTPQYQGLTWQRLEHKVDGLQWPCFDENHPGTPILHTE
TFLRGKGRMIPVSYRLPAEMPDSEYPLTLSTGRLLEQFHTGTMTRKTPELDIKGSPRVMI
SVYDAEKLGVSNGDMLILSTRRGTIEIAAFVTKRAQVGVLFLPFHFAEAAANKLTINALD
PIAKIPEYKVCAVKAEKLHPVCLVE
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacatcactatcgacggtaaaacactatcgcttccccaggcggacagcttatta
aaagctgccactgatgccggtattaatattcccaacttgtgtgacttttcccacagtaag
gccaagcagcagtgtaatttatgccaagtacaaataaaaaatcatgatggcagcttacgc
tgtgttcgtgcttgcgagacagccctagaaaccggcttagaagtgattacccaatcaagc
tatttaagtaaaattcgtcaagaggcacttgagaatattctcagcgatcactttgccgat
tgcgaagcgccctgccaaacggcctgtccagctggcgttgatgtgcaatcgtatctttat
catattggcaaaggcgattataaagaagcggtaaaggtcatcaaaaaaaccttaccttta
cccttgtctattggccgtgtttgcccagcattttgtgaagctgagtgtcgccgtggactg
gtagatgaacccgtggcgattcgtcaactcaaacgtcatgcagcagacttagatttagcg
gatttagaatcttacgttccgccaaaagctcctgctactaataaacgtattgctattatc
ggtagcggccctgccggactcactaccggttattatctctctaataatggtcacgatgtg
accattatggagtcggcccctaaagctggtggctggttacgttacggtattccagagtat
cgtttacctaaagatattcttgataaagaaattgagctgctcacccgtaacggacttaag
atcaaaaccggatgtgcgttaggtcgtgataccaatttaaccgaattggtggccaattat
gatgcggtgtgcctcgcaattggggcgcaaaaagccgtacccatgaattacccaggcagc
gatttacaaggctgttatttaggggtggattatttacgcgattattgcacagataaaaaa
ttcattaccggcaaaaaagtggccgttattggtggtggtaacactgcgattgattgcgca
cgaacggctgtacgcgatggtgctgatgtcaccttaatctatcgccgtagccgtgatgaa
atgccagcagaaccctatgaaatacatgaagcagaagaggaaggggttaagtttcacttt
cttactaatccaattgaaaaccacagcgatagtcaaggccgagttaaatccgtcacgttt
gctaaaatggcgttgggtgaacctgatacatcaggtagacgttctcccaaggcgaccggc
gtaacttttgaagaagcatttgatactgttattccagcggtgtctcaacaagtcgatttg
gactttttagaccagccagaaaaccaaatagacacaggccacctcgccctcacccgctgg
cacactttccttggctgtgaacaaaccatgtctgccggtatagaaaaactatttgttatt
ggtgattcacgcacaggccctgggactgcagttggtgcggtggcagatggtcgaaaagct
gctgaagccattgaaggattattaactgatggcttaacctgtcatttagaacaaggacta
tttaactcccgaaaagccaacaaaacagcctcattatctgctgagctatatcctgactta
taccccgagatagctaaacgtcctcgactaaaaatgcctgaattaagtcagttaaatcga
acccttaattttgccgaggtggagctagggtttgttcctgatgaagcaatgaaagaagcc
atgcgctgtttagaatgtgcttgccaagccaataccgattgtaagttgcgtgactatgcc
accgaatataaagttgacggtaaaacactggatcaaactcaggcgcgtaaatttaaagtc
gataatagtgcgccttttattacttttgatgccaatcgctgtatcagttgtggggcttgc
gttgaagcctgccatcaacaaagtggccataatgttatctgctttgaacccaatagctat
caagcgttacccgatgcgacaacagcaggcattatccgcaatgctcctcgtgttggcttc
acagcgtcgatgaatgacagtgattgcgtacaatgtggcaactgtgttcaagcctgccct
actggcgccttggttgatgcccgagataaaacccaaggcaccgacagagagttaaccaaa
acctctaccgtgtgcacatattgtggtgtcggttgtcgtgttgaactgcatgtcgaccag
caaaccaatcacgttatgcgagttactggtgatactcactccttggtcaatgaaggcatg
ctgtgtgtgaaagggcgctctggttttgactttttgaatagtcctaaacgccttacaacg
ccattaattcgtaaaaatggtcagctacaaccagccagttggaacgaggccattagctat
attagcgagcaacttcaaccgattaaagatgccgctgggccgagcaagtttgctgcatta
tcttctgctaaatgcaccaatgaagaaaactatttaatgcaaaaattcacccgtagcatt
atgggtaccaatagcatagatcactgtgcaagattgtgtcattcatcaacggtagcaggc
ttatccgataccattggcggtggcgcaatgactaacgatattcccagcattaaagactca
gatgtgatttttatcatcggctccgacaccaccagcgcccaccctattattgcttcacat
atcaaacgcgcggtgagccaacacggcgcacgcttaattgtcgcggacccaaagaaaacc
actatcgcagacagcgctaacctttatgtctctcatcgacctggcacagatgtcatgctg
cttaatgccatcatgcagcaaataattatcaatgattggcaagatgccgattacatcaat
aatcgtgttgaagactatgcattgctcaagcaagaagtgatgaagcccgattacaactta
gccaatgcggagctaatcactggcgtgagtgccgaagatattgccactatggcaaaaatg
attggcacagcaacaaaaaccgccttgtattacgccatgggaataacccaacatacctcg
ggttatgacaatgtagtgtccacctctaacttacagttactgtgtggcaacataggtgta
aatggcgccggactgaatccactacgcgggcaaagtaatgttcaaggtgcttgcgatatg
ggcgcgttacccaattattatcccggttaccaaaaaatcaatccgagtaataacgctaaa
tttgccaaagcctggggcaacacatcgctaaattcagagataggattagccgcaactgaa
atcatgcatgcgattgttaaaggcaaactcgatgccttgtatatattgggggaaaacccg
gtgttaagcgatccggatcaagcccatgtagtcgccgcgctgtccaaaataaaatttatg
gtcgtgcaagatatctttttaaccgaaaccgcgcagatggcacatgtggtattacccgca
acctcctttgctgaaaaagatggccatttcactaacaccgaacgtcgagtgcaacaatta
cgtgtggcgttaacaccaccgggtgaagcaattgtagattggaaaatcattcaaatgatt
gccaacaccctaggcgcaaattggaattaccacagcaccaaagacatttgggatgaaatt
aatcacgtcaccccgcaatatcaaggtctgacttggcaacgccttgaacacaaagtagat
ggtttacaatggccatgctttgatgaaaaccatcctggcaccccgattttacataccgag
acatttttgcgcggcaaaggcagaatgattccagtgagttatcgtctacctgctgaaatg
ccagatagtgagtacccattaacattgtctactggtcgtttattagagcagttccatact
ggcaccatgacccgcaaaaccccagagcttgatattaaaggctcgcctagagtgatgatt
tcggtttacgatgcagaaaagttaggtgtgagtaatggcgatatgttaatcctcagcacc
cgcagaggaaccattgaaatagccgcctttgtgactaaacgtgctcaggtaggcgtacta
tttttacccttccactttgccgaagccgcagccaataaactgaccattaatgcattggat
cctattgcaaaaattccagaatataaggtgtgtgccgttaaagcagaaaagttacacccg
gtatgtttagtggaataa
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