Shewanella polaris: FH971_16190
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Entry
FH971_16190 CDS
T06579
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
spol
Shewanella polaris
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spol03009
]
FH971_16190
Ribosome biogenesis [BR:
spol03009
]
Prokaryotic type
ribosomal protein modification factors
FH971_16190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QDE32366
UniProt:
A0A4Y5YIK5
LinkDB
All DBs
Position
complement(3750938..3753124)
Genome browser
AA seq
728 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFIKVYCK
ARDISTENIKLSQNNIVDPEDRYNQIFQIQVELPDDLSDKDRQGILRSIERCTVKKVVQT
GPEFKIETVDNLDADANAMLMGQPQGDENTFILGKDLPLEQTIKNMTGLLADLGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGTE
IANSEFVHYPNEKWFALEGNDSLPSGILDDYCLDIYNPDEELCGSHLIDTNSGNKDRGIC
TIPYTRQSDGETVYFPSNLIENLFLSNGMSAGNNLQEAHVQCLSEIFERAVKRQIIEQEI
VLPDVPMAVLEKYPSILAGIKGLEEQGFPIVVKDASLGGQFPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
FSSKFDYEFCEWDFTGTSEEEASGLFGILEAMGKEVYIAEFTDLGASACRILVPEYSEVY
PVDDLIWDNTNKALNYREDILNLHSLSTKALGKLVNRLEESQLDNHTDIRTLIGIVFDEN
TVWGQLTIIELKILIYLALGAHEDAIELVGEFLQFNDNTVQRGLFYQAVNAVLEVTLDED
LELEHFIGNFNRMFGQDVMDNVVGSVNGTVRFYGLSKTSMNLEGIEPHLRLIESYKKLHQ
ARKIKAGI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagtaaattttctcgataacttgagactcgaagctaaatttgacgacttt
accgtcacggccgatcaacctattcgttataaaggtgatggttcagctcctagtcctttt
gattatttcttagcatcgtctgcgctgtgtgcggcttactttatcaaggtgtattgtaaa
gctcgtgatatttcgactgaaaatatcaagttgtcgcaaaacaatattgttgatcctgaa
gaccgctacaaccaaatattccaaatccaggtggaattaccggatgatctttcggataaa
gaccgccaaggtattttgcgttcgattgagcgttgcaccgttaagaaagtagtacaaact
ggccctgagtttaaaattgaaaccgttgataaccttgatgcagacgccaatgcaatgttg
atgggccaacctcaaggtgacgagaatacttttatcttgggtaaagatttaccgcttgaa
caaaccatcaaaaacatgactggcttattagccgatcttggaatgaagattgaaatctcc
tcttggcgaaatattgtgccaaacgtttggtctttgcatatccgtgatgctgcatcacca
atgtgttttactaacggtaaaggtgccactaaagaaagcgcattatgttcagcattaggt
gagtttattgagcgtctcaataataactttttttataatgatcaattctttggtactgaa
atcgcaaatagcgagtttgtacattatccaaatgaaaaatggtttgcactcgaaggtaat
gattcgttaccttcaggtattttagatgactattgcttagacatttataacccagatgaa
gagttatgtggctcgcacctaattgataccaattctggtaataaagatcgtggtatttgt
actattccatatacacgccaatctgatggtgaaacagtttatttcccgtcgaaccttatt
gaaaatttgtttttaagtaatgggatgagtgcaggtaataacttgcaagaagcccatgtt
cagtgtttatctgaaatttttgagcgtgcggtaaagcgtcaaatcattgaacaagaaata
gtgcttcctgatgtgccaatggcggtactagagaaatacccaagtattttagcgggtatt
aaagggcttgaagaacaggggttccctattgtagtgaaagatgcttcattaggcggccaa
ttccctgtcatgtgcgtgaccttgatgaaccctcgtaccggtggtgtctttgcctcgttt
ggtgcacatcctagctttgaagtggcattagagcgcagcttaaccgagttattacaaggt
cgcagttttgaaggcttaaacgatgtgccaaagccaacgtttaacagcatggcagtaact
gaaccagaaaactttgttgagcactttatcgattcaacaggggttatctcttggcgcttc
tttagtagtaagtttgattatgaattctgtgaatgggattttactggcactagtgaagaa
gaagccagcggtttattcggtatcttagaagccatgggcaaagaagtttatattgccgag
tttactgatttaggtgcgtctgcttgtcgtattttagtccctgaatattctgaagtgtat
ccagttgatgacttgatttgggacaacaccaataaagccttaaactaccgtgaagacatt
ttaaacctgcattcactaagcactaaagcgttaggtaagctagtgaatcgcttagaagaa
agtcaattagataatcataccgatattcgcactttaatcggcattgtgttcgacgagaac
actgtttggggccaattaactattatcgaattgaagatcttgatttacctagcattagga
gcccatgaagacgccattgagttagtcggagagttcttgcagtttaacgacaatactgtg
caacgaggtttattctatcaagctgtgaacgcagtattagaagtgacgttagatgaagat
ttagagcttgagcattttattggcaactttaaccgtatgttcggtcaagatgtgatggac
aatgtggtaggttcggttaatggcacggtgcgtttttatggcctgagcaaaactagcatg
aatttagaaggtatcgagccgcatctacgtttgattgaaagttacaagaaactgcaccaa
gcgcgtaaaattaaagctggaatataa
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