Shewanella polaris: FH971_16560
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Entry
FH971_16560 CDS
T06579
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
spol
Shewanella polaris
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spol03009
]
FH971_16560 (rluD)
Enzymes [BR:
spol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
FH971_16560 (rluD)
Ribosome biogenesis [BR:
spol03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FH971_16560 (rluD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TruB_N
CT47
Motif
Other DBs
NCBI-ProteinID:
QDE32430
UniProt:
A0A4Y5YHZ8
LinkDB
All DBs
Position
complement(3814631..3815605)
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AA seq
324 aa
AA seq
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MTQEINLKSEITATQTGLRLDQALAALFPDYSRTRIKEWILSGAITVDGITVDKPREKVF
ETQLIEVTATIEEEVRAQAQNIDLNIVYEDDHILVVNKQAGLVVHPGAGNADGTLMNALL
HHCPSIEHVPRAGIVHRLDKDTTGLMVVAKTVEAQTHLVAALQARDIVREYEAIVLGTMT
AGGTVDEPIDRHATRRTQMAVIHGGRPSVTHYRVAEKFRAHTRLRLRLESGRTHQIRVHM
AYIGHELVGDPVYGGRPRPPKSASPEFFELLKGFNRQALHAVRLELAHPFTCEIMTWHAP
IPDDMAELTKALRVDTELNPIVYL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagagattaatctaaaaagcgagatcacagcaacacaaaccggtctgagattg
gaccaagcattagctgctttgttccctgactattcgcgcacacgcatcaaggaatggatc
ctatctggtgcaattactgttgacggtatcacagtcgacaagccacgggaaaaggttttc
gaaactcaactgatagaagtgactgccactattgaggaagaagtgcgtgcacaagcacaa
aatatcgaccttaatattgtttatgaagatgatcatattttagtggtgaataagcaagca
ggtttggttgttcatcctggtgcgggcaatgccgacggcacattgatgaacgcattgtta
catcattgtcctagtattgagcacgttccaagagcgggtattgtacatcgattagataag
gacaccacgggcttaatggttgttgctaaaacggttgaagcacaaacacacttggtagcg
gccttacaagctcgtgatattgttcgcgaatatgaagcaattgtattgggtaccatgacc
gctggtggcactgttgatgaacctatcgatcgtcacgcaactagacgtacccaaatggcc
gtgatacatggtggtcgcccatcagtgactcactatcgtgtcgctgagaaattccgggct
catacgcgtttgcgtttacgtttagagagtggtcgaactcaccaaattcgtgttcatatg
gcatatattgggcatgagcttgttggtgatcctgtttatggtggtcgacctcgtcctcct
aaatctgctagcccagagttttttgagttgcttaaaggctttaatcgtcaagcattacat
gcggtgcgtttagagcttgctcatccatttacttgtgaaatcatgacatggcatgcgcct
attcctgatgacatggctgagttaactaaagcactacgagttgatacagagcttaatccg
atagtgtatttataa
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