Shewanella polaris: FH971_16910
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Entry
FH971_16910 CDS
T06579
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19235
L,D-transpeptidase YbiS
Organism
spol
Shewanella polaris
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spol01002
]
FH971_16910
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spol01011
]
FH971_16910
Peptidases and inhibitors [BR:
spol01002
]
Cysteine peptidases
Family C82
FH971_16910
Peptidoglycan biosynthesis and degradation proteins [BR:
spol01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FH971_16910
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
QDE32492
UniProt:
A0A4Y5YI50
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All DBs
Position
3891297..3892214
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AA seq
305 aa
AA seq
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MINSLRSTFIAATAIVLSFSSAAVEYRLPAEGSNLVGENQYYVVPEGKLTLEQIASQFQL
GLTNLLEANPGVDPFLPKSGSTLLIPHQLILPDTKREGVVINSAEMRLYYYPKGKNIVEV
LPIGIGQIGKDTPENWVTQVYRKRANPTWTPTVNIRKSYAAKGITLPAVWPAGADNPMGL
FALYVGNLYAVHGTNATFGIGLRVSSGCVRLRDEDIKHLFETVPVGTRVEFINKPIKATE
EPDGNRYLEVHEPLSRNQAEFESTEPVPLSFDKNTTRFVAHPDTDSFTLKRLLEQRSGMP
TRINP
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgataaattcgttacgctctacttttattgcagcgaccgctattgtattaagtttttcg
agtgctgctgttgaatatcgtctacctgctgaaggcagtaatttagttggtgaaaaccaa
tattacgtggttccagaagggaaactcaccttagaacaaattgcatcacagtttcagctc
gggttgactaatttattagaagctaaccctggtgttgacccatttttgccaaaatcaggt
agcactttattgatccctcaccagttaattttaccggatactaagcgtgaaggcgtggtg
attaactcggctgaaatgcgtttgtattattatccaaagggtaaaaatattgtcgaagta
ttgcctattggtattggccaaataggaaaagacacccctgaaaattgggtgactcaagta
tatcgtaaacgcgcaaatccaacgtggacacctacagttaacattcgcaaatcttacgcg
gctaaagggataacattaccagcagtatggccagctggtgctgataaccctatgggtttg
ttcgcactttatgtaggcaatttatacgctgttcatggtactaacgccacgttcggcata
gggttacgagtaagttctggttgtgttcgtttacgcgatgaagatatcaaacatttattt
gagaccgtaccagttggcactcgagttgagtttatcaataaacctatcaaggccactgaa
gaacctgatggcaatcgttatttagaagtccatgagccactctcacgcaaccaagcagaa
tttgaatcaacagagccagtgccattatcattcgataaaaacaccactcgttttgttgct
cacccagacactgattcatttacattaaagcgcttgcttgaacaacgttctggcatgcca
actcgcattaatccataa
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