Shewanella polaris: FH971_18085
Help
Entry
FH971_18085 CDS
T06579
Name
(GenBank) class I SAM-dependent rRNA methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
spol
Shewanella polaris
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spol03009
]
FH971_18085
Enzymes [BR:
spol01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
FH971_18085
Ribosome biogenesis [BR:
spol03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FH971_18085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
Cons_hypoth95
Methyltransf_31
PrmA
tRNA_U5-meth_tr
Methyltransf_15
MTS
Smr
Methyltransf_25
TRM
Motif
Other DBs
NCBI-ProteinID:
QDE32702
UniProt:
A0A4Y5YIR5
LinkDB
All DBs
Position
4140560..4141567
Genome browser
AA seq
335 aa
AA seq
DB search
MSIQAVVTEALAKRASFIEQAKQNNTDCYRVFHGTVEGENGLNIDRYGDAWLIQTFHQTL
TAQQLEDISSILTAHADYHIVYNDRSGSHSRVVNNVENEAQDYSQSEQVIHENGIAFTSK
LRHEGQDPLLFLDMRIGREYVCDNSQDKTVLNLFSYTCGIGTAAAMGGARRVMNVDFSSF
ALAAGQKNAELNNVTDVCEFVQSDAFPALRQLAGLPIGGRRNQKLPKYPKLRATQFDLVF
LDPPRFAKSAFGIVDLVNDYQGLFKPAVLTTKVGGKIVCCNNVAKVERQAWYDSLVRCVE
KQGRKVTATQWLACHPDFPAFDDNHPLKIVVLTID
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcaagctgttgtaaccgaagcactagccaaacgtgcgagttttattgagcaa
gcaaaacaaaataacaccgattgttatcgggtatttcatggcactgttgaaggtgagaat
ggcctaaatatcgaccgttacggtgatgcatggttaatccaaacctttcatcaaacatta
acggcgcaacaacttgaagacatatcaagcatacttaccgcccacgcagactaccatatc
gtttacaacgatcgctcaggcagtcattctcgtgtggtaaataatgtcgaaaatgaagcc
caagactactcacaatcagaacaagttatccatgaaaatggcattgcctttacttccaaa
ctgcgtcatgaaggtcaagacccactgctatttttagacatgcgtattggccgcgaatat
gtttgcgacaatagccaagacaagacggtattaaacctattttcatacacttgtggtatt
ggtactgctgcagcaatgggcggtgctcgtagagtcatgaatgtcgacttttcatcattt
gcattagctgctgggcaaaaaaatgctgagctaaacaatgtcaccgatgtgtgtgaattt
gtgcaaagtgatgcgtttccggcattacgtcaattagcgggtttacccattggtggtcgt
cgtaatcaaaaactgcctaaataccctaaactgcgcgcaactcaattcgatttagtgttt
ttagatcctccacgttttgctaaaagtgcattcgggattgtcgacttagtgaatgattac
caaggcttgtttaaaccagcagtattaacaacaaaagttggcggtaaaattgtctgttgt
aataatgtcgctaaagttgagcgtcaagcatggtacgacagtcttgtacgctgcgtagaa
aaacaaggccgtaaagtgaccgcaactcaatggttagcttgccatccagactttcccgca
tttgatgacaatcatccattaaaaatcgtggtattgactatagattaa
DBGET
integrated database retrieval system
