Shewanella polaris: FH971_19855
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Entry
FH971_19855 CDS
T06579
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
spol
Shewanella polaris
Pathway
spol00540
Lipopolysaccharide biosynthesis
spol01100
Metabolic pathways
Module
spol_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FH971_19855
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spol01005
]
FH971_19855
Enzymes [BR:
spol01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
FH971_19855
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
FH971_19855
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
FH971_19855
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
FH971_19855
Lipopolysaccharide biosynthesis proteins [BR:
spol01005
]
Lipid A
FH971_19855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_4_4
Epimerase_2
Sulfotransfer_3
Motif
Other DBs
NCBI-ProteinID:
QDE33024
UniProt:
A0A4Y5YJY3
LinkDB
All DBs
Position
complement(4538816..4540078)
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AA seq
420 aa
AA seq
DB search
MNRIVYSFFLYLMFPLVILYLAFRAIKSVDYRHRWSERFGFTKLMPTDVLIHCVSMGETL
AAIPLIKQLMTAHPDDTFTVTTTSPTGSAEVLKAFGDTVQHCYLPFDFSYAIKGFLRQIQ
PKVCIIMETELWPNLVYFAARQQVTLILANARLSQKSANKYAKKRRLAVPMLNKLNLITV
QTQREAERFIDLGVEAQRIHVCGSVKFDLTIDPIKKQHAIALRAEWHRVNSPIWVAGSVH
PGEFEAILTAHKQLLSLFPDALLIMAPRHPEQFNLAAITVTQSGLTLARRSMNDEVTANT
QVLLGDTMGELVMLYGAADQAFIGGTLINNGGHNPLEPAAMGLPVYVGPNHWDFAEITQL
LADAGALTCISSADELAQELQNKFTDNNMYQSASTAALAVVEQNRGALLKQFTLINKLIV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtattgtttattctttctttctatatttaatgtttccgctggttatcctctat
ctagcatttcgggcgataaaaagtgtcgactatcgtcatcgttggtctgaacgctttggt
tttaccaagttaatgccaacagatgtgttgatacactgtgtttctatgggagaaacgcta
gcggctattccgttgattaagcaacttatgactgcacaccctgatgatacatttacggtt
acaacaaccagcccaacagggtctgctgaagtgcttaaagcatttggcgatacggtgcaa
cattgctatctaccatttgatttctcttatgcgatcaaaggctttttacgtcaaatacag
cctaaagtgtgcattattatggagactgaattgtggccaaatttagtctactttgccgcg
cgacaacaagtgacattgattttggctaatgcgcgcttgtcacaaaagtcagcaaataaa
tacgctaaaaaacgtcgtttggctgtgccaatgctaaacaagctcaacttgattactgta
caaactcagcgtgaagcagaacggtttattgatttaggtgtggaagctcaacgtatacat
gtgtgtggtagtgtaaagttcgatcttactattgaccctataaagaaacagcacgcaata
gcacttcgtgcagagtggcatcgcgttaactctcctatttgggttgcgggtagtgttcat
cccggtgagtttgaggcgattttgaccgcccataagcaactattaagtctttttcctgat
gcattattaattatggcaccacgacacccagagcaatttaatttagccgctattaccgtc
acccagtcagggttgacgttagctaggcgcagtatgaatgatgaggtgactgcgaatact
caagtattgcttggcgatactatgggagagctagtgatgttatatggcgctgcagatcag
gcatttattggcggcacattaattaataatggtggtcataatccacttgaacctgccgcg
atggggctgcctgtgtatgttggtcccaatcattgggactttgctgaaatcacacaatta
cttgctgatgcgggtgcattaacctgtattagttctgcagatgaattagcgcaagaatta
cagaataagtttaccgataacaatatgtaccaatcagcatctacagcggctctggctgtg
gttgaacaaaatcgtggtgcattattaaagcaattcacactgattaataagcttattgtt
taa
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