Shewanella polaris: FH971_20005
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Entry
FH971_20005 CDS
T06579
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spol
Shewanella polaris
Pathway
spol00061
Fatty acid biosynthesis
spol00071
Fatty acid degradation
spol01100
Metabolic pathways
spol01212
Fatty acid metabolism
spol02024
Quorum sensing
spol04146
Peroxisome
Module
spol_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FH971_20005
00071 Fatty acid degradation
FH971_20005
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FH971_20005
09145 Cellular community - prokaryotes
02024 Quorum sensing
FH971_20005
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spol01004
]
FH971_20005
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spol04147
]
FH971_20005
Enzymes [BR:
spol01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FH971_20005
Lipid biosynthesis proteins [BR:
spol01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FH971_20005
Exosome [BR:
spol04147
]
Exosomal proteins
Exosomal proteins of breast milk
FH971_20005
Exosomal proteins of breast cancer cells
FH971_20005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QDE33053
UniProt:
A0A4Y5YKN1
LinkDB
All DBs
Position
complement(4571233..4573026)
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AA seq
597 aa
AA seq
DB search
MSLNQYHVVRLLQQQSQSLGGNIALEGFDMPAPWHMVTWGAFNTITDSVAQLLIEFGLQV
QDKVVILAQNCPQWTCADIGALKARNVVVPVYPTSTIDQAVFIVNDAQAKLIFADNQQQY
DMACAIAAQAECVQHIVVFDANVTLNADNHVYFDHVLTAQFNPLITDELNTRLANTSLDD
LFTLIYTSGTTGNPKGVMLDYRNFASMINQHDSELPFTPGDVSLAFLPLSHVFERGWSMY
VLCRGGHNVYLNDTHRIKEALIAVRPHNLCAVPRFLEKIYSAVHDKVSKASKPRQALFAW
AMAVGKRQFEVNQGRASGSLWLSAQWKLANKLVFSKLQQVLGGRLKFMPVGGAALDVNVG
SFFHSIGVPVLCGYGMTETCATVTCNTLDNRVPGSNGKPLDAMQIKLGKDDEILVRGETV
MRGYYNRPEDTAEAFEDGWLKTGDAGRIDEQGNLYITDRIKELMKTSNGKYIAPQRVEGK
VACCPFIEQVAIVADARNYVSALIVPAFEALEAWAQAQGIHVENPIELLRHSQVVAHFEQ
RLKELQFELASFEQIKKFTLLHEAFSMEAGLITPTLKLRRKMIYSKYHTEINAMYGH
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcactaaatcaatatcacgtcgttagacttctacaacaacaaagccaatctttaggt
ggtaatattgcccttgaaggctttgatatgcctgctccttggcatatggtgacgtggggt
gcatttaatacgattacagactctgtcgcacagttgttaattgaatttggtttacaagtg
caagataaagtagtcattttagcccaaaactgcccgcaatggacttgtgccgatatcggt
gcccttaaggcgcgtaacgtggtggtgcctgtgtatcccactagcacgattgatcaagcc
gtatttattgttaacgatgctcaggcaaaattaatttttgctgataaccaacaacaatat
gacatggcatgtgccattgccgcacaagctgaatgtgtgcaacacattgttgtgtttgac
gctaatgtgaccctgaatgccgataatcatgtgtattttgatcacgtattaaccgcgcaa
tttaatccccttattacggatgaactcaataccagattagcgaataccagcttagatgat
ttattcacgctgatttacacctctggtaccacaggtaatcccaaaggtgtgatgctcgac
taccgtaattttgcctccatgattaaccaacatgacagcgagttacctttcactccgggt
gatgtgtcattagcctttttaccgctaagccatgtatttgagcgcggttggagcatgtat
gtgttatgccgtggtggccataatgtgtatttaaatgatactcatcgcattaaagaagct
ctaattgcggttagaccacataacttatgtgccgtgccgcgattcttagaaaagatatac
agcgccgtacacgataaagtcagtaaagcctctaaaccaaggcaagcactttttgcttgg
gcgatggcagtaggtaaacgtcagttcgaagttaaccaaggccgtgcctctggaagttta
tggttaagtgcacagtggaagttggctaacaagttggtttttagcaagctacagcaagta
ttgggtggccgtttaaagtttatgcctgtcggtggtgctgcactcgatgttaatgtgggc
agcttttttcacagtattggtgttccagtattgtgtggttatggcatgacagaaacctgc
gctacggtaacctgtaatactttagataatcgtgtgccaggatcaaacggtaaaccgtta
gatgctatgcaaattaaactaggcaaagacgacgaaattttggtgcgtggcgaaacagtg
atgcgtggttattacaatcgccctgaagataccgctgaagcctttgaagacggctggtta
aaaaccggtgatgctggtcgtattgatgagcaaggtaacttatatattaccgatcgtatt
aaagaattaatgaaaacctctaacggtaaatatattgctccgcaacgggttgaaggtaag
gtggcatgttgtccgtttattgaacaagttgctattgttgctgatgcgcgtaactatgta
tcagcgctaattgtacccgcttttgaagctttagaagcctgggctcaggcccaaggtatt
catgttgaaaacccaattgagttattacgtcactcacaagtggtagcgcattttgagcag
cgcttaaaagagttgcagtttgaattagccagttttgaacaaatcaaaaaattcacctta
ttacatgaagcattttcgatggaagcgggtttaattactcccacattaaagttgcgccgt
aaaatgatttacagtaaatatcatactgaaattaacgccatgtatggtcattga
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