Flagellimonas maritima: HME9304_00536
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Entry
HME9304_00536 CDS
T05505
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
spon
Flagellimonas maritima
Brite
KEGG Orthology (KO) [BR:
spon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spon03016
]
HME9304_00536 (truA)
Enzymes [BR:
spon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HME9304_00536 (truA)
Transfer RNA biogenesis [BR:
spon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HME9304_00536 (truA)
Prokaryotic type
HME9304_00536 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
AWX43547
UniProt:
A0A2Z4LQL6
LinkDB
All DBs
Position
complement(589437..590183)
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AA seq
248 aa
AA seq
DB search
MRYFIRFSYFGKAYHGWQNQPNAITVQEVLEKALSTLLRQKIEIIGAGRTDAGVHAKEMY
AHFDFDTITDREALIYRLNAFLPEDISVKEIECVKADAHARFDAIERIYQYWVIQEKNPF
YSDFAHFVRQPIDINAMNTSASFLMDHTDFESFSKSNTDVRTFNCSIKRAVWTKEEDKLV
FTITADRFLRNMVRAIVGTLLNVGVGKMKPEDINTIIKNKDRGEAGVSVPAKGLYLTGIL
YPKQLFDE
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
ttgagatattttatccgattttcctatttcggaaaagcttaccatggatggcagaaccaa
cccaacgctattacagttcaagaagtactggagaaagcgctgtctaccctattgcgccaa
aaaattgaaataatcggtgcaggaagaacggatgcaggggttcatgcaaaggaaatgtac
gcccattttgattttgatacaattacggatagggaagcccttatttatcgacttaacgct
tttcttcccgaagatatatccgttaaggaaattgaatgcgttaaagcagatgcccatgca
cgttttgatgccattgaacgaatatatcaatattgggtgattcaggaaaaaaacccgttc
tattcagattttgcccattttgtgagacagccgatagatattaatgccatgaatacatca
gcatcatttttgatggaccatactgattttgaatctttttccaaatccaataccgatgtc
agaacattcaattgttccattaaaagagccgtttggaccaaagaagaagataagctggtc
tttacaattactgcagataggtttcttcgcaatatggtaagggcaattgtaggtacattg
ctcaatgtaggtgttggtaaaatgaaaccagaagatatcaatacgattatcaaaaataag
gataggggagaagctggagtttctgtacccgcaaaaggattatatttgactggaatatta
tatcccaaacaactttttgatgagtaa
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