Flagellimonas maritima: HME9304_00736
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Entry
HME9304_00736 CDS
T05505
Symbol
dnaQ
Name
(GenBank) DNA-directed DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spon
Flagellimonas maritima
Pathway
spon03030
DNA replication
spon03430
Mismatch repair
spon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HME9304_00736 (dnaQ)
03430 Mismatch repair
HME9304_00736 (dnaQ)
03440 Homologous recombination
HME9304_00736 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spon03032
]
HME9304_00736 (dnaQ)
03400 DNA repair and recombination proteins [BR:
spon03400
]
HME9304_00736 (dnaQ)
Enzymes [BR:
spon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HME9304_00736 (dnaQ)
DNA replication proteins [BR:
spon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HME9304_00736 (dnaQ)
DNA repair and recombination proteins [BR:
spon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HME9304_00736 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
GIY_YIG_2
DEDDh_C
DUF7508
DNA_pol_A_exo1
PipA
SYF2
Motif
Other DBs
NCBI-ProteinID:
AWX43745
UniProt:
A0A2Z4LPE3
LinkDB
All DBs
Position
832485..833867
Genome browser
AA seq
460 aa
AA seq
DB search
MYTIIDIETTGNGIKGNKITEISIFKYDGEKIVDEFTSLVNPCCPIPYFITGLTGIDNEM
VRDAPTFEEVANKINEITKDSIFVAHSVNFDYGVIKEEFRKIGIDFTRKKLCTVRLSRRL
IPGLRSYSLGKLCSAINIPLTNRHRARGDAHATVLLFQKLINAPKATDIFQKFLNARSQE
ATLPPHLPKSIFNNIPQKPGVYHFINQKKEIIYVGKANNLKNRVLGHFYDKSTKEIKMCN
ETVNINFKLSGSELLALLMESTDIKDYFPKYNRSQKRITKQYAIFGYEDRKGIVHLAYNA
LKGTPNPLRIFYNQTDCRAFLEELCQIFSLCPKYCNLQDTNSPCSHHFINSCKGICTSKE
SVVDYNKKVKAAITSIKATLSEARIIKEEGRNSNENAVVLIDEGIYKGYGFIDNESEIST
KEDIEAFIIPQKNTLETNRIINSYLLKKNVLSKKIPVYSS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgtatacaattatagacatagagaccactggaaatggaataaagggaaacaagataacc
gagatttccatttttaagtatgatggcgagaaaatagttgatgagtttacatcattggta
aatccctgttgtcccatcccatattttattacaggattaacgggaattgataatgaaatg
gttcgggacgctcccacttttgaagaggttgcgaataaaataaacgaaattaccaaggat
tccatttttgtggcacattctgttaattttgattatggcgtcatcaaagaagagttcaga
aaaataggaatcgattttaccagaaaaaagctgtgtaccgtccgtttgtcccgaagatta
ataccaggtttacgatcctacagcttaggcaaattatgttcggccataaatattccttta
acaaatagacatagggcaagaggtgatgcacatgcgacagtattgctttttcaaaaatta
ataaacgctcccaaagcaacagatatcttccaaaaattcttgaatgcaagaagtcaagaa
gccacactgccaccacatctccctaaatcaatttttaacaatatcccacaaaagcctggg
gtctatcattttataaatcaaaaaaaagaaattatctacgtaggaaaagcaaataattta
aaaaacagggttttggggcatttctacgataagagcacaaaagagattaaaatgtgcaat
gaaacagtaaatatcaattttaagctttctggcagtgagttgcttgcacttctaatggaa
tcaacggatataaaagactattttccaaaatataacaggtcgcaaaaaaggataacaaaa
caatatgccatttttggctatgaagaccgaaagggtatagtacaccttgcctataacgcc
ttaaaaggtacacccaaccctttaagaatattttataatcaaacagattgcagggctttt
ttagaagagctctgccaaattttttctctttgtcccaaatactgtaatctacaagatacc
aattctccttgctctcaccatttcattaattcttgtaagggcatctgcacttccaaagaa
tctgtggtcgattataataaaaaagtgaaagcggccatcacaagcataaaagcaactctt
tcagaggcaagaatcattaaggaggaaggaagaaatagtaatgaaaatgctgttgtattg
attgacgaaggaatctataaaggttatggatttatagataatgagtccgaaatttcaaca
aaggaagatatcgaggcttttataattccacaaaaaaatactttggagacaaatagaatc
ataaattcttatctactgaaaaaaaatgttctgagcaaaaaaattcctgtgtattcaagc
taa
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