Flagellimonas maritima: HME9304_01973
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Entry
HME9304_01973 CDS
T05505
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spon
Flagellimonas maritima
Pathway
spon03030
DNA replication
spon03430
Mismatch repair
spon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HME9304_01973
03430 Mismatch repair
HME9304_01973
03440 Homologous recombination
HME9304_01973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spon03032
]
HME9304_01973
03400 DNA repair and recombination proteins [BR:
spon03400
]
HME9304_01973
Enzymes [BR:
spon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HME9304_01973
DNA replication proteins [BR:
spon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HME9304_01973
DNA repair and recombination proteins [BR:
spon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HME9304_01973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
DUF5026
Motif
Other DBs
NCBI-ProteinID:
AWX44966
UniProt:
A0A2Z4LT50
LinkDB
All DBs
Position
complement(2179924..2184309)
Genome browser
AA seq
1461 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDTYNWPRCVQIAWQLHDGLGNLIEHQDMLVRPDGFNVPY
EAEQIHGISTALAEQEGVALNQVLELFNEALSKAKFVVGQNVDFDINIMGCEFHRMNSET
RLTSLPVLDTCTEKTAELCKIPGGRGGKFKLPTLTELHQFLFREPFAEAHNATADVEATT
RCFLELVRKKHYSPNELDVQPDYFEHFSEANPKEIELIGLKHINLKNASKEIAEALWAGE
TGDISDEEIKENVESLADAPFVHLHNHSQFSVLQSTINIKDLIRATAENGMPAVALTDHA
NMMGAFHFVKEVKAHNKNVKEKNNELVANGEPISEKEIKPIIGCEFFVCEDHTNKSVKDY
GYQIVLLAKNKKGYLNLAKMSSIAYTDGFYYVPRIDKKIIEQYKEDVIALTGNLYGEVPN
KILNVGEKQAEEALLWWKEHFGNDLYMEMMRHGQEDEDRVNQVLVPMAKRHQVKLVATNN
TYYCAKKDAEAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSSEEIKTLFKDLPE
AILNIQEVVDKVEPFDLARDVLLPKFDIPEEFKIKEDEADSGKRGENSYLKYITYEGAKK
RYSEIDEEIRERIDFELKTIENSGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSVVAY
CLGITNIDPLKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMDYVIQKYGANQVAQIIT
YGTMAAKSSIRDTARVLDLPLNDADRIAKLIPNMSKLNKIFGVDESDLKKIFRSDDLEKV
HELLNISEGDDLEGQTVKMARVLEGSLRNTGIHACGVIITPDDITNFVPVATAKDSDLYV
TQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKARTGVELIPDEFPLDDEKTYELFQR
GDTVGIFQYESPGMQKHMKNLKPTVFDDLIAMNALYRPGPMEYIPSFIARKHGDEKITYD
LPDMEEYLKETYGITVYQEQVMLLSQKLAGFSKGDADVLRKAMGKKIFALLQKLKPQFLD
GGEKNGHPRDILEKIWKDWEAFASYAFNKSHSTCYAFIAYQTAYLKAHYPAEYMAAVLSN
NMNDIKQVTFFMEECKRMGLEVLGPDVNESYYKFAVNKDNAVRFGMGAIKGVGRSAVETI
VQNRKEDGPYKSVFDLAKRVELRAANKKSFENLALAGGFDSFGDTHRAQYFHDEGDGITF
LEKVIKSAAKYQENKNSSQMDMFGGMSEAQIAEPIVPPCDDWGTMEKLRREKEVVGIYIS
GHPLDDFKKEINAFCNSNVSAFTNLDTYVNRELTVAGVITDVQHRISKNGKGWGLFTLED
YTDTHEFRIFGEEYLKFRHFLMINSFVHMKAFVREGWVNRETGKKGEPRLQFNDFKQLQD
VMDAYAKKLTIKLNIDALQEKRIQTLKDTLVSHKGDHQLNFVVYEMKDEIKLNLSSRKQK
VKINSELLSVLEENEIHYKLN
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgattttcgataccgaaaccactggattgcccaaacgttgggatgcaccaata
accgatacctataattggccccggtgcgtacaaattgcttggcaattgcatgatggtttg
ggtaatttgatagagcatcaagatatgctggttaggccagacggattcaacgtaccctac
gaagcggaacaaattcatggtatatcaacagctttagcagaacaggaaggagtagcgttg
aatcaagtgctggaactatttaatgaagcgctctccaaagcaaaattcgtagttggtcaa
aatgtggactttgatatcaatatcatggggtgtgaatttcaccgtatgaattctgaaacg
cggttgacttcgctccctgttttggatacttgtaccgagaagactgctgagctttgcaaa
attccaggcggtcgtggaggaaaatttaaattaccaacccttacagaattacatcaattt
ctttttagggagccttttgcagaggcacataatgcaactgctgatgttgaagcaaccact
agatgttttttggagttggtccgcaaaaagcattattctcccaatgaactggatgtacag
cctgattattttgaacacttctcggaggccaatcccaaagagattgagcttattgggcta
aaacacatcaacctaaaaaatgcttccaaagaaattgccgaagcactttgggcaggagaa
acgggtgatatttccgatgaagaaattaaagaaaatgttgaaagcttagctgatgcacct
tttgtgcaccttcacaatcactcccagttttcggtacttcaatccactatcaatatcaag
gatttgatcagagctaccgctgaaaacggaatgcccgccgtggcattgacagatcacgcc
aacatgatgggagcctttcactttgtaaaagaagtcaaggcacataataaaaatgtaaaa
gaaaaaaataatgaactggttgcaaatggtgaacccatttcagaaaaagaaatcaaacct
attattggctgcgaattttttgtctgcgaggatcacaccaacaaaagtgttaaagactat
ggctatcaaatagttttactggcaaaaaataaaaagggctatctgaatcttgcaaaaatg
tcctccatagcttacaccgatggattttactatgtacccagaatagataaaaaaatcatt
gaacaatataaagaagatgttattgcgctcactggtaatttatacggtgaagtacccaat
aaaatactgaatgttggagaaaaacaggcggaagaagctttgctatggtggaaagaacat
tttggcaatgatttatatatggagatgatgcgacacgggcaagaagatgaagaccgtgtc
aaccaagttttggttccaatggccaagcggcatcaagttaaactagtcgctaccaataac
acttattactgtgccaaaaaagatgctgaagcacatgatatccttttatgtgttaaggat
ggagaaaaacaggctacaccaattggcaggggacgtggatatcgttatggcctgcccaat
caagaatattattttaagtcttcagaagaaataaagaccttgttcaaagaccttcctgag
gcaattctaaatattcaagaagtcgtagataaagttgaaccattcgatttggccagggat
gtcctacttccaaaatttgatattccagaagaattcaaaattaaagaagatgaagcggat
agtggaaagcggggcgagaattcctatttaaagtacataacctatgaaggggccaaaaag
cggtacagcgaaatagatgaagagattagggagcgaattgattttgaattaaagaccata
gaaaattcaggttacccaggatatttcttgattgtagaggattttatccgtgaagctcgc
aatatggatgtttccgtaggaccaggtcgtggttcagcggcaggttctgtagttgcttac
tgtttgggcattaccaatattgaccctttaaaatatgatttactttttgagcgcttccta
aatccagatagggtttctatgcccgatatcgatatcgattttgatgacgaaggtcgggga
agagtcatggattatgtaattcaaaaatatggtgccaatcaggttgcccaaatcatcacc
tatggtaccatggcggcaaaatcttcaattcgtgatacagcccgggttttggatttaccc
ttaaacgatgcggaccgtattgccaagcttatcccaaatatgtccaaactgaataaaatt
tttggggtcgatgaatcagaccttaagaaaatattccgctcggatgatttggaaaaagtg
catgagttgctcaacatttctgaaggagatgacctagaaggacaaactgtaaagatggcc
agagtcctagagggctcgcttagaaataccggcatacacgcatgtggtgttattattact
ccagatgatattaccaattttgttcctgtagctactgcaaaggattcagatttatatgta
acacagttcgataattctgtcgttgaaagtgcaggactcttaaaaatggactttttggga
ttaaaaaccctaacgcttataaaagataccgtcaaaatagtcaaggccagaactggagtt
gaattgattcccgatgagtttccattggatgacgaaaagacctatgagctttttcaaagg
ggggataccgtaggtatattccagtacgagtcgccaggaatgcaaaagcacatgaaaaat
ctgaaacccacggtttttgatgacctcattgctatgaacgcactttatagaccgggccca
atggaatacattcccagttttattgcacgtaaacatggggatgaaaagattacttatgac
ctcccggacatggaggagtatctgaaagaaacttatgggataactgtctatcaggagcaa
gtgatgctactctcccaaaagcttgccggtttctcaaagggtgatgcagatgttttacgg
aaagcgatggggaaaaagatttttgccttgctacagaaattgaagccccaatttttggat
ggtggcgaaaaaaatgggcatccaagagatattcttgaaaaaatatggaaagactgggag
gcatttgcatcttatgcatttaataaaagtcactccacatgctatgcatttatagcttat
caaaccgcatatttaaaagcccactacccagccgagtatatggctgcagtgttgtccaac
aacatgaacgatataaaacaggttaccttctttatggaagaatgcaaacgcatgggatta
gaagtacttggtccagatgtaaatgaatcctattacaagtttgccgtaaacaaggacaat
gccgtccgttttggcatgggtgcgatcaagggggttggacgttccgcagtggaaaccata
gtgcaaaatagaaaagaagatggtccctataaatcagtttttgatcttgccaaacgtgta
gaattacgtgcagccaataaaaaatcctttgaaaatcttgctttagcaggcggattcgat
tcttttggcgatacacatcgtgcacaatattttcatgatgaaggagatggaatcactttt
ttagaaaaagtaattaagtccgctgcaaagtatcaggaaaataaaaactcctcgcagatg
gatatgttcggaggaatgagcgaagcgcaaattgctgaacctatcgtccctccatgtgat
gattggggtacaatggaaaagcttcggcgtgagaaagaagtagtaggtatctacatttca
gggcatcctttagatgatttcaaaaaagaaataaacgcattttgcaatagcaacgtatcc
gcttttaccaatctggatacttatgtaaatcgagaacttaccgtggcaggagttataacg
gatgtgcaacatcgtatttcaaaaaatggtaagggatgggggttgttcacacttgaagac
tataccgatacccatgagtttaggatttttggagaggaatatctcaagttcagacatttt
ctaatgatcaactcatttgttcacatgaaggcatttgtacgtgagggatgggtcaatagg
gaaacggggaagaagggagagcctagattacagtttaatgattttaaacaactacaggac
gtaatggatgcctacgccaaaaaactgaccattaaacttaatatcgatgcacttcaagaa
aagcgaatacagactttaaaagacacgcttgtttcccataaaggagaccaccaattgaat
tttgtagtatatgaaatgaaggatgagataaagctcaatctatctagcaggaaacagaag
gtaaaaataaatagtgaacttctttctgtactggaagagaatgagatacactacaaatta
aattga
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