Flagellimonas maritima: HME9304_02097
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Entry
HME9304_02097 CDS
T05505
Symbol
dpo1
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spon
Flagellimonas maritima
Pathway
spon03030
DNA replication
spon03410
Base excision repair
spon03420
Nucleotide excision repair
spon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HME9304_02097 (dpo1)
03410 Base excision repair
HME9304_02097 (dpo1)
03420 Nucleotide excision repair
HME9304_02097 (dpo1)
03440 Homologous recombination
HME9304_02097 (dpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spon03032
]
HME9304_02097 (dpo1)
03400 DNA repair and recombination proteins [BR:
spon03400
]
HME9304_02097 (dpo1)
Enzymes [BR:
spon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HME9304_02097 (dpo1)
DNA replication proteins [BR:
spon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HME9304_02097 (dpo1)
DNA repair and recombination proteins [BR:
spon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HME9304_02097 (dpo1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HME9304_02097 (dpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AWX45088
UniProt:
A0A2Z4LUN7
LinkDB
All DBs
Position
complement(2305748..2308582)
Genome browser
AA seq
944 aa
AA seq
DB search
MPDQKRLFLLDAYALIFRGYYALIKNPRINSKGMDTSAIMGFMNSLFDVIKREKPDHLAV
AFDKGGSVERTEMFEEYKANRDETPDAIRIAIPYIQQILNAMKIPVVELEGYEADDLIGT
LAKQAEKEDYKVFMVTPDKDFGQLVSENIFMYRPARMGNGIEIWGIPEVQKRFGVERPEQ
VIDYLGMMGDASDNIPGLPGVGDKTAKKFLEQFESMEGLLANTDKLKGKMKEKVEENAEL
GRLSRKLAEIKIDCEVTFNADDFEMCEPDAEKVQQIFEELEFRRLKEQFLKIFSGETETV
TQVTSTPTAKQQAKVAGSGQFTLFGGNPSEAAATIKDINSRQTITEVPHFYQTVKEGLSI
KLFMEKLMQQKSVCFDTETTSLNPLEAELVGIAFSWEAKKGFYIPIPEDKVTALGILEEL
RPFFESEAIEKIGQNLKYDIKVMKNYGIEVKGKLFDTMLAHYLINPDMRHNMDVLAETYL
NYTPVSITELIGKKGKNQLSMRQVPLEKQTEYASEDADITLQLAQQFRPELLEAKTEELF
ESIEIPLLRVLADMETEGINLDEDFLKELSTVLDVDIKNLEQKIYKAAGEEFNIASPKQL
GEILFDKLKLVDKPKKTKTGQYSTAEDVLSYLAKNHEIIKNVLDYRGLAKLKSTYVDALP
EQVETKTKRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPRDENYTLLAA
DYSQIELRIIAALSEEDTMIEAFKNGEDIHASTASKVFNVPIDEVTREQRSNAKTVNFGI
IYGVSAFGLSNQTDLTRAESKELIETYYKTYPKLRNYMGEQVDFARDNGYVQTVLGRRRY
LKDINGSNAVVRGAAERNAVNAPIQGSAADIIKIAMINIHKKLSEGNYKTKMLLQVHDEL
VFDAYKPELEDVKNMIKIEMENAYTLAVPLDVEVGIGDNWLEAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccaaaaaagactctttcttttagatgcctacgctttaatttttcgcggttac
tatgcccttataaaaaatcccagaatcaattccaaaggaatggacacctcggcgataatg
ggttttatgaattcactatttgatgttataaaacgagaaaaaccagatcacttggcggtt
gcttttgataaaggtggaagtgtggagcgcacggaaatgttcgaagaatataaagccaat
cgtgacgaaacgccagatgctattagaatagcgattccatatatccaacaaattctgaac
gcaatgaaaattcccgtggtagaattggaaggttatgaagcggacgacttgattggcact
ttggccaaacaggcagaaaaagaagattataaggtttttatggttactcctgataaggat
tttggccaattggtttctgagaacattttcatgtatcgccccgcaagaatgggtaacgga
atagaaatatggggaattcccgaagtacagaaaagatttggggtagaaaggccagaacaa
gtgatagactatctgggcatgatgggcgatgccagtgacaatattcccggtttgcctggc
gtaggcgataaaaccgcaaaaaaattccttgagcaatttgaatccatggaaggactattg
gcaaacaccgataagctaaaaggaaaaatgaaggagaaagttgaggaaaacgcagagttg
ggaagattgtcccgaaaattggccgagataaagatagattgcgaagttacctttaacgcg
gacgattttgaaatgtgcgaacccgatgcagaaaaggtgcagcaaatctttgaagagctg
gaatttagaaggctaaaagagcagttcttaaagattttttccggtgaaaccgaaactgtt
acccaagtgaccagcacgcctactgccaaacaacaggcaaaagtagcggggagtggacag
tttactttatttggggggaacccttctgaagctgctgccactattaaggacataaatagc
agacagactattacagaagtaccacatttttatcaaactgttaaggagggtttgtccata
aaactttttatggaaaaattgatgcagcaaaaatcggtctgttttgatacagaaacaacg
tcccttaatccgttggaggccgaactggtgggaattgcttttagctgggaagccaaaaaa
ggattttatatccctatcccagaagataaagtaacagctttgggaattttagaggaactt
cggcctttctttgaatctgaagccatagaaaaaattgggcaaaacctaaagtacgatatc
aaagtgatgaaaaattatggtattgaagtaaagggaaaattgttcgataccatgctggca
cattacctcatcaatccggatatgcgccataatatggacgtgcttgcagagacgtatctc
aactatactccagtttccattacagaacttatcggcaaaaaaggaaaaaaccaattgagc
atgcgacaggtccctttggaaaagcaaaccgaatatgcatctgaagatgccgacattact
ttacaattagcgcaacaatttagacctgagcttttagaagcaaagaccgaggagcttttt
gaaagtattgaaattcccctactaagagttttggcggacatggaaaccgagggtataaat
cttgatgaagattttttgaaggaattatcaaccgttcttgatgtcgacatcaaaaatctg
gaacaaaaaatctataaagccgcgggcgaggaattcaatattgcttcaccaaaacaattg
ggcgaaatcctttttgataaattgaaattggtggataaaccaaaaaaaaccaagacaggg
caatactccactgctgaagatgtactctcctatttggccaagaatcatgaaatcattaaa
aatgtgttggactaccgagggcttgccaaattaaaaagtacctatgttgatgcactccct
gagcaagtggagacaaaaacaaaacgtgtacatacagattatatgcaaactgttgctgct
acgggaaggctaagtagcaataatccaaatttgcagaatattccaattagaacggaacgt
gggcgacaggttagaaaagcctttattccgcgtgatgaaaactatacattgttggcagct
gattattcccagatagaattgcggataattgcggctttgagcgaggaggatacaatgatt
gaagcctttaaaaatggagaggatattcatgcctcaacagcttccaaagtgttcaatgta
cctattgacgaggtcacccgtgaacagcgtagtaatgcaaaaacagtaaattttggaatc
atttatggtgtttcggcatttgggctcagcaaccaaacggatttaacacgtgccgaatcc
aaagaacttatagaaacctattataaaacttatcccaaactgcgtaattatatgggtgaa
caggtagattttgccagagacaatggttatgtacagactgttttgggaagacgcaggtat
ttaaaggacattaatggcagcaatgcggtcgttcgcggtgctgcggaacgaaatgcggta
aatgcacctattcaaggaagtgcagcggatatcatcaaaatcgccatgattaatattcac
aagaaactttctgaaggaaactacaaaacgaaaatgttgttacaggtacacgatgaattg
gtttttgatgcctacaaaccggaactggaggatgtaaaaaacatgataaaaattgaaatg
gaaaatgcctacacgcttgcagttcctttagatgtggaagtggggattggtgacaattgg
ttagaggcgcattag
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