Flagellimonas maritima: HME9304_02914
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Entry
HME9304_02914 CDS
T05505
Name
(GenBank) DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spon
Flagellimonas maritima
Pathway
spon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HME9304_02914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spon03019
]
HME9304_02914
03400 DNA repair and recombination proteins [BR:
spon03400
]
HME9304_02914
Enzymes [BR:
spon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HME9304_02914
Messenger RNA biogenesis [BR:
spon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HME9304_02914
DNA repair and recombination proteins [BR:
spon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HME9304_02914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AWX45883
UniProt:
A0A2Z4LW29
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All DBs
Position
complement(3228474..3230366)
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AA seq
630 aa
AA seq
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MQKQPKSILKEFWGHDAFRGSQKKIIDSVITGNDVLALLPTGGGKSICYQIPGLAKEGIC
IVVSPLVALIQDQVNQLKSKGIKAIALIGGISHEELINLLDNCCFGNYKFLYLSPERLQQ
TMVQERIREMNVNTIAIDEAHCISQWGNDFRPAYLDCAILKELAPKAPMIALTATATPKV
VQDILENLKLEQVQLFKDSFSRSNISFKVKQTEDKLYQLKKYFSTSKGSGIVYVRSRKMS
VSLSEFLNKNGFTASFYHGGIAKIEKEEKLNLWLKEDIKIIVATNAFGMGVDKSNVRSVL
HYQIPDSLESYFQEAGRAGRDGQRATALMLITKEDEDLAKQQFLSSLPNVGFVKRLYLEL
NNYFQISYGESTMETFGLEFNLFCKRYSFNPSMTYNGLRILDQNSVIALSDRYNEKNMLR
FIASKEGIFDYLNHNRKVAPLIQTILRTYGGITEYETKINIHLISQKTGKTEKYIKIILH
QMHIDGIVAYKSSSNDLEITFLVPREDERTINIFAKKITDFNIVKEKNMRTMLDYVNNSS
LCRSTFILRYFGEKTKEDCGSCDICLENKGAAQTDIKEEIINCLKTEPKTSRELVPYFAV
EEKVLLENLRQLLEDEVLLLNHNNEYVIKQ
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaagcaacctaaatctattttaaaggaattttggggccatgatgcgtttaggggg
tcacaaaagaaaattatcgattccgtaattacgggtaatgatgttttggcgttattgccc
actggaggcggtaaatctatctgttaccaaattcccggtctggccaaagaaggtatttgc
attgtagtatcacctttagtggctttaatccaagaccaagtaaatcaattaaaatcaaaa
ggaataaaagctattgccctaattgggggtatatctcatgaagagctgatcaatctactg
gataattgttgttttggaaattataaatttctttacctatctcctgagcgtttgcaacag
accatggtgcaagaaagaataagagaaatgaacgtaaacaccattgccattgatgaagct
cactgcatctcacaatggggcaatgattttagacctgcctatttggactgcgcaatctta
aaagaactcgctccaaaggcacccatgatagcccttacggcaacagctacgcctaaagtt
gtgcaggacattttagaaaacttaaaactggaacaggttcagctattcaaggattctttt
tcaaggtctaatataagttttaaggtaaaacaaaccgaggataaactatatcaactaaaa
aaatacttttccacttccaagggtagtggaattgtttatgtaaggtcacggaaaatgtcc
gtatcactttcggaatttttgaataaaaatgggtttacagcctctttttatcatggcggc
attgccaagattgaaaaagaggagaaattgaatttgtggctaaaagaagatattaaaatt
atagtagctacaaatgcttttggaatgggtgtggacaaatcaaacgttcgctcggtttta
cattaccaaattcctgatagtttggagagttacttccaagaagctggcagagctggtagg
gatggccagagagctacggcactaatgctgattactaaagaggatgaagacttggcaaaa
caacagtttttatcttctttgccgaatgtaggttttgtaaaaagactatatcttgaattg
aacaactattttcaaatttcctatggtgaatcaaccatggagacattcggattagagttt
aatttattttgtaagcgatacagttttaatccaagcatgacctataatgggctgagaatt
cttgaccaaaattctgtaatagcattatcagatcggtacaatgaaaaaaacatgcttagg
tttattgcttcaaaagaggggatttttgattacttgaaccacaacagaaaagttgcaccg
cttatacagacaattttaaggacttacggcggaataactgaatacgagaccaaaatcaat
attcatttgatttcacaaaaaacggggaagaccgaaaaatatataaaaattattcttcac
caaatgcatattgacgggattgtagcatacaaaagctcatccaacgatttagaaataact
tttttggtgcctcgtgaagatgaacgtacgataaacattttcgcgaaaaaaatcactgat
ttcaatatcgtgaaagaaaaaaatatgcgaactatgttggattatgttaacaattccagt
ttatgcagaagtaccttcatattgaggtattttggtgaaaaaaccaaagaagattgtggt
tcttgcgatatttgtctggaaaataaaggcgctgcgcaaacagatataaaggaagaaatc
attaattgtttaaaaaccgaacctaaaacttcaagagaacttgttccctattttgctgtt
gaggaaaaggtacttttggaaaatcttcgacaattacttgaagacgaagtgctactattg
aatcataacaacgaatatgtcatcaaacaataa
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